Detailed information of Lsat_s009.g0018.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s009.g0018.t1NADP-SPECIFIC ISOCITRATE DEHYDROGENASELsat_scaffold00911097131162957+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00180Iso_dhIsocitrate/isopropylmalate dehydrogenaseDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004790FamilyIsocitrate dehydrogenase NADP-dependentInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR019818Conserved_siteIsocitrate/isopropylmalate dehydrogenase, conserved siteInterproscan
IPR024084DomainIsopropylmalate dehydrogenase-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11822NADP-SPECIFIC ISOCITRATE DEHYDROGENASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000287Molecular Functionmagnesium ion bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004450Molecular Functionisocitrate dehydrogenase (NADP+) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005777Cellular ComponentperoxisomeInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006102Biological Processisocitrate metabolic processInterproscan
GO:0006739Biological ProcessNADP metabolic processInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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