Detailed information of Lsat_s008.g0526.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s008.g0526.t1DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDLsat_scaffold0081249753612536050+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04300FBAF-box associated regionFamilyInterproscan
PF05729NACHTNACHT domainDomainInterproscan
PF13271DUF4062Domain of unknown function (DUF4062)FamilyInterproscan
PF13374TPR_10Tetratricopeptide repeatRepeatInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR007111DomainNACHT nucleoside triphosphataseInterproscan
IPR007397DomainF-box associated (FBA) domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR025139DomainDomain of unknown function DUF4062Interproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051191FamilyDDB1-CUL4-associated factor 12Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR19860DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0080008Cellular ComponentCul4-RING E3 ubiquitin ligase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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