Detailed information of Lsat_s008.g0093.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s008.g0093.t1GATOR COMPLEX PROTEIN WDR59Lsat_scaffold00819232061969044-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF17120zf-RING_16RING/Ubox like zinc-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR006575DomainRWD domainInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR039456DomainWDR59, modified RING finger, H2 subclass, C3H3C2-typeInterproscan
IPR049566DomainWDR59/RTC1-like, RING zinc finger domainInterproscan
IPR049567FamilyGATOR complex protein WDR59-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46170GATOR COMPLEX PROTEIN WDR59Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005774Cellular Componentvacuolar membraneInterproscan
GO:0034198Biological Processcellular response to amino acid starvationInterproscan
GO:0035591Molecular Functionsignaling adaptor activityInterproscan
GO:0035859Cellular ComponentSeh1-associated complexInterproscan
GO:1904263Biological Processpositive regulation of TORC1 signalingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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