Detailed information of Lsat_s007.g0635.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s007.g0635.t1GASTRULATION DEFECTIVE PROTEIN 1-RELATEDLsat_scaffold0071276890612808770+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF02126PTEPhosphotriesterase familyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001559FamilyPhosphotriesteraseInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR032466Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR051858FamilyWD repeat-containing GAD-1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR16017GASTRULATION DEFECTIVE PROTEIN 1-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0009056Biological Processcatabolic processInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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