| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s007.g0523.t1 | NOTCH LIGAND FAMILY MEMBER | Lsat_scaffold007 | 10845258 | 10880432 | + |
| CDS | |||||
| Lsat_s007.g0523.t1 | |||||
| Transcript |
| Lsat_s007.g0523.t1 |
| Protein |
| Lsat_s007.g0523.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00008 | EGF | EGF-like domain | Domain | Interproscan |
| PF00054 | Laminin_G_1 | Laminin G domain | Domain | Interproscan |
| PF02210 | Laminin_G_2 | Laminin G domain | Domain | Interproscan |
| PF12661 | hEGF | Human growth factor-like EGF | Domain | Interproscan |
| PF21410 | MAP6 | Microtubule-associated protein 6 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000152 | PTM | EGF-type aspartate/asparagine hydroxylation site | Interproscan |
| IPR000742 | Domain | EGF-like domain | Interproscan |
| IPR001791 | Domain | Laminin G domain | Interproscan |
| IPR001881 | Domain | EGF-like calcium-binding domain | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR003645 | Domain | Follistatin-like, N-terminal | Interproscan |
| IPR007882 | Family | Microtubule-associated protein 6 | Interproscan |
| IPR009030 | Homologous_superfamily | Growth factor receptor cysteine-rich domain superfamily | Interproscan |
| IPR013032 | Conserved_site | EGF-like, conserved site | Interproscan |
| IPR013320 | Homologous_superfamily | Concanavalin A-like lectin/glucanase domain superfamily | Interproscan |
| IPR018097 | Conserved_site | EGF-like calcium-binding, conserved site | Interproscan |
| IPR050906 | Family | Notch signaling pathway | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24044 | NOTCH LIGAND FAMILY MEMBER | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000226 | Biological Process | microtubule cytoskeleton organization | Interproscan |
| GO:0005112 | Molecular Function | Notch binding | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005516 | Molecular Function | calmodulin binding | Interproscan |
| GO:0005874 | Cellular Component | microtubule | Interproscan |
| GO:0008017 | Molecular Function | microtubule binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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