| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s007.g0047.t1 | TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT | Lsat_scaffold007 | 1207331 | 1221959 | - |
| CDS | |||||
| Lsat_s007.g0047.t1 | |||||
| Transcript |
| Lsat_s007.g0047.t1 |
| Protein |
| Lsat_s007.g0047.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02186 | TFIIE_beta | TFIIE beta subunit core domain | Domain | Interproscan |
| PF18121 | TFA2_Winged_2 | TFA2 Winged helix domain 2 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003166 | Domain | Transcription factor TFIIE beta subunit, DNA-binding domain | Interproscan |
| IPR016656 | Family | Transcription initiation factor TFIIE, beta subunit | Interproscan |
| IPR036388 | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR040501 | Domain | TFA2, Winged helix domain 2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12716 | TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001097 | Molecular Function | TFIIH-class transcription factor complex binding | Interproscan |
| GO:0005673 | Cellular Component | transcription factor TFIIE complex | Interproscan |
| GO:0006367 | Biological Process | transcription initiation at RNA polymerase II promoter | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
