Detailed information of Lsat_s006.g0476.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s006.g0476.t1ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDLsat_scaffold0061220568912311397-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00454PI3_PI4_kinasePhosphatidylinositol 3- and 4-kinaseFamilyInterproscan
PF02260FATCFATC domainFamilyInterproscan
PF15785SMG1Serine/threonine-protein kinase smg-1FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR000403DomainPhosphatidylinositol 3-/4-kinase, catalytic domainInterproscan
IPR003152DomainFATC domainInterproscan
IPR011009Homologous_superfamilyProtein kinase-like domain superfamilyInterproscan
IPR014009DomainPIK-related kinaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR018936Conserved_sitePhosphatidylinositol 3/4-kinase, conserved siteInterproscan
IPR031559FamilySerine/threonine-protein kinase SMG1Interproscan
IPR036940Homologous_superfamilyPhosphatidylinositol 3-/4-kinase, catalytic domain superfamilyInterproscan
IPR039414DomainSMG1, PIKK catalytic domainInterproscan
IPR050517FamilyDNA Damage Response and Repair KinaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11139ATAXIA TELANGIECTASIA MUTATED ATM -RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0004674Molecular Functionprotein serine/threonine kinase activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006468Biological Processprotein phosphorylationInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0016301Molecular Functionkinase activityInterproscan
GO:0016310Biological ProcessphosphorylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP