| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s006.g0454.t1 | SPARC OSTEONECTIN | Lsat_scaffold006 | 10633980 | 10660958 | - |
| CDS | |||||
| Lsat_s006.g0454.t1 | |||||
| Transcript |
| Lsat_s006.g0454.t1 |
| Protein |
| Lsat_s006.g0454.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00086 | Thyroglobulin_1 | Thyroglobulin type-1 repeat | Domain | Interproscan |
| PF10591 | SPARC_Ca_bdg | Secreted protein acidic and rich in cysteine Ca binding region | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000716 | Domain | Thyroglobulin type-1 | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR019577 | Domain | SPARC/Testican, calcium-binding domain | Interproscan |
| IPR036857 | Homologous_superfamily | Thyroglobulin type-1 superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13866 | SPARC OSTEONECTIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005518 | Molecular Function | collagen binding | Interproscan |
| GO:0005615 | Cellular Component | extracellular space | Interproscan |
| GO:0048856 | Biological Process | anatomical structure development | Interproscan |
| GO:0050840 | Molecular Function | extracellular matrix binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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