| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s005.g0502.t1 | ADAPTIN, ALPHA/GAMMA/EPSILON | Lsat_scaffold005 | 13076495 | 13106569 | + |
| CDS | |||||
| Lsat_s005.g0502.t1 | |||||
| Transcript |
| Lsat_s005.g0502.t1 |
| Protein |
| Lsat_s005.g0502.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01602 | Adaptin_N | Adaptin N terminal region | Repeat | Interproscan |
| PF02296 | Alpha_adaptin_C | Alpha adaptin AP2, C-terminal domain | Family | Interproscan |
| PF02883 | Alpha_adaptinC2 | Adaptin C-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002553 | Domain | Clathrin/coatomer adaptor, adaptin-like, N-terminal | Interproscan |
| IPR003164 | Domain | Clathrin adaptor, alpha-adaptin, appendage, C-terminal subdomain | Interproscan |
| IPR008152 | Domain | Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain | Interproscan |
| IPR009028 | Homologous_superfamily | Coatomer/calthrin adaptor appendage, C-terminal subdomain | Interproscan |
| IPR011989 | Homologous_superfamily | Armadillo-like helical | Interproscan |
| IPR012295 | Homologous_superfamily | TBP domain superfamily | Interproscan |
| IPR013041 | Homologous_superfamily | Clathrin adaptor, appendage, Ig-like subdomain superfamily | Interproscan |
| IPR016024 | Homologous_superfamily | Armadillo-type fold | Interproscan |
| IPR017104 | Family | Adaptor protein complex AP-2, alpha subunit | Interproscan |
| IPR050840 | Family | Adaptor Complexes Large Subunit | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22780 | ADAPTIN, ALPHA/GAMMA/EPSILON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0006886 | Biological Process | intracellular protein transport | Interproscan |
| GO:0015031 | Biological Process | protein transport | Interproscan |
| GO:0016192 | Biological Process | vesicle-mediated transport | Interproscan |
| GO:0030117 | Cellular Component | membrane coat | Interproscan |
| GO:0030122 | Cellular Component | AP-2 adaptor complex | Interproscan |
| GO:0030131 | Cellular Component | clathrin adaptor complex | Interproscan |
| GO:0035615 | Molecular Function | clathrin adaptor activity | Interproscan |
| GO:0072583 | Biological Process | clathrin-dependent endocytosis | Interproscan |
| GO:0140312 | Molecular Function | cargo adaptor activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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