Detailed information of Lsat_s005.g0367.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s005.g0367.t1NUCLEOPORIN-LIKE PROTEIN 2Lsat_scaffold0051010111610111550+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF05495zf-CHYCHY zinc fingerDomainInterproscan
PF14608zf-CCCH_2RNA-binding, Nab2-type zinc fingerDomainInterproscan
PF18044zf-CCCH_4CCCH-type zinc fingerDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR008913DomainZinc finger, CHY-typeInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR037274Homologous_superfamilyZinc finger, CHY-type superfamilyInterproscan
IPR041367DomainE3 ligase, CCCH-type zinc fingerInterproscan
IPR051767FamilyNucleoporin NUP42 domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46527NUCLEOPORIN-LIKE PROTEIN 2Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005049Molecular Functionnuclear export signal receptor activityInterproscan
GO:0005635Cellular Componentnuclear envelopeInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP