Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
Lsat_s004.g0662.t1 | POLYCOMB GROUP PROTEIN | Lsat_scaffold004 | 17532146 | 17566130 | + |
CDS | |||||
Lsat_s004.g0662.t1 | |||||
Transcript |
Lsat_s004.g0662.t1 |
Protein |
Lsat_s004.g0662.t1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00536 | SAM_1 | SAM domain (Sterile alpha motif) | Domain | Interproscan |
PF02820 | MBT | mbt repeat | Domain | Interproscan |
PF12140 | SLED | SLED domain | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001660 | Domain | Sterile alpha motif domain | Interproscan |
IPR004092 | Repeat | Mbt repeat | Interproscan |
IPR013761 | Homologous_superfamily | Sterile alpha motif/pointed domain superfamily | Interproscan |
IPR021987 | Domain | SLED domain | Interproscan |
IPR038348 | Homologous_superfamily | SLED domain superfamily | Interproscan |
IPR050548 | Family | Polycomb group and chromatin remodeling factors | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR12247 | POLYCOMB GROUP PROTEIN | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003682 | Molecular Function | chromatin binding | Interproscan |
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
GO:0042393 | Molecular Function | histone binding | Interproscan |
GO:0045892 | Biological Process | negative regulation of DNA-templated transcription | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |