Detailed information of Lsat_s004.g0566.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s004.g0566.t180 KDA MCM3-ASSOCIATED PROTEINLsat_scaffold0041526498615311960+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF03399SAC3_GANPSAC3/GANP familyFamilyInterproscan
PF12815CTDSpt5 C-terminal nonapeptide repeat binding Spt4RepeatInterproscan
PF13634Nucleoporin_FGNucleoporin FG repeat regionFamilyInterproscan
PF16769MCM3AP_GANPMCM3AP domain of GANPFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000504DomainRNA recognition motif domainInterproscan
IPR000717DomainProteasome component (PCI) domainInterproscan
IPR005062DomainSAC3/GANP/THP3, conserved domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR025574RepeatNucleoporin FG repeatInterproscan
IPR031907DomainGerminal-centre associated nuclear protein, MCM3AP domainInterproscan
IPR034265DomainMCM3AP, RNA recognition motifInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR045107FamilySAC3/GANP/THP3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR1243680 KDA MCM3-ASSOCIATED PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0070390Cellular Componenttranscription export complex 2Interproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP