Detailed information of Lsat_s003.g0053.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s003.g0053.t1POLYCYSTIN FAMILY MEMBERLsat_scaffold00313307161384640+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF02010REJREJ domainFamilyInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR051223FamilyPolycystinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP