Gene detail

Detailed information of Lsat_s002.g0470.t1 in Lamellibrachia satsuma Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Lsat_s002.g0470.t1	AROMATIC AMINO ACID HYDROXYLASE	Lsat_scaffold002	13048485	13069359	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Lsat_s002.g0470.t1

TCACTGACAGTTCTCACCGATTTCAGCCACAGTGTTCGACTCCGATCAAGACATCTGCCTTCCAAGTCTGCTTTTTATTCACGATTGACGAAGCAAAGCTACGTAGACCATGAGTATCAAAGACAAGCGTGGTGACATCACCAGGACGACTTTTGTGTTGGCCCTCAACAGCGATGTGGCCGAATTGGCGAAGGTACTCGACATTATGAAGGAGAAGAAGGCCAAGCTGGTGCACATCGAGTCTCGGACGAGCCGGGATCGGGAGGCGAGCAGTGACATCTACGTGGACGTGGAGACGAGAGGCGGCCCGGAGTCGTTGGAGGCGCTAACGGCGGCGCTCAGACAGCACTGCACCAAGGTAGACGTGCACCGCATCGAGCGGCTGTCGCGGGGCATGAAGAAGACAACCTCGCTGGATAAGGGCAGCACGAAATACACGCCCGACGGAATTCCGTGGTTCCCAAAACAGATATCTGACCTGGATAAATCAGCCAACCGTGTGCTGCTTTACGGAACTGAGCTGGACGCAGATCATCCGGGATTCAAGGATCCTGTGTATCGGGCTCGGAGAAAACAACTGGGAGAGATCGCTTTGAATTACACACATGGTCAGCCGATACCCAGAGTGGACTACACAGAAGAGGAGACCAACACCTGGAGGACGATCTACCGAGAGTTGCATCGCATATACCCGACCCATGCCTGCCAGGAGTATCTGGCTAACTGGCCGCTACTTCAAAAGAACTGCGGCTACAGCGAAGATCATCTGCCTCAGCTGGAGGACATATCGGTCTATCTAAAACAGAAGACTGGATTTACCCTGAGACCGGTGGCGGGTTATTTGTCTTCACGTGACTTCCTGGCTGGGCTAGCCTTCCGCGTGTTCCATTGCACACAATATATTCGACACAGTTCCGACCCGTTCTATACACCAGAACCAGATTGCTGCCATGAGCTGTTGGGTCACATGCCTCTCTTTCTCAACCCGGCCTTCGCGGAGTTCTCGCAGGAGATCGGCCTCGCCTCCCTCGGAGCCACCGAGGAACAAGTGCAAAAGTTGTCGACGTGTTATTTCTTCACGGTTGAGTTCGGTTTGTGCAAGCAAAATGGCTCCCTCAAAGTGTATGGAGCGGGGCTGTTGTCTTCCGCAGCCGAACTGAAACATGTGCTATCGGAGAAGGCCGTAGTAAGAAGGTTCGACCCAGAGATAACATGCGACACGGAGTGTATGATCACCACGTTCCAGAACGAGTACTTCTTCACCGACACGTTCGATGAAGCCAAGGCCAAACTGAGGGCGTATTCGCGCACGGTCGATCGCCCGTTCGAGGTGCGGTATGACCCGTACACGCAGACGGTGAACGTGCTCGACAACCCTGCGAAGATCGGCCGAGTCATCGGCAAACTGCAGGAGGAGTTATCTGTGCTGGCGTGTGCCCTCGGAAAGGTCTAGGACACCACGCAATCTCTAGACAGAAGAGCGGTAATAGAAACAGTATGCAACTTCGAGTTTTTATGCTCGGAAACCATGGAAAATATTTACAAATACAGTCAAGATATGGTCTTGTGGACATATGTTTGGTCTTGCAAAATCATGTCCAGGGAGATTACGCAGACGATAAATGCTTAATTCTGCATCTGCCAGGAAGATTGCAACAATTTTTGAAAACACCCGGCGTGTTTTGGAAATTTAAATTTATAGAAAAAGTCACACAAATTAAGGGAATTTGAGAAAATATGTAATTAATACATTCGAAAACTCGAGAAACTGGAATGAATAATGTAACACGAGGTTGGCACCTGATAAGTAGGAGCATAACATACAGGTGTGTGAGTTTTTATACACACACCGGTGACTATTTGTTTTTTCATCCTAGTTTACCTTACAACAGCAATTGAGCACGGTAATATAATGATGGAAACCGTTGAATGACATACTCAACGGTCAGGATGTGCAACATTAATTGTGAAGGCTGCTTATAATAAGTTCTATAAAAACAATGTACACTGGATGCCGACCTGCACAGAACTAACGTTGAACCAACACATTGCGACACCCACTAACACTGATGACATAGGACGGTAGTCACTGTATAATGACCGCAGCAAAACATTAATATTTGTAAGCAGTATGTGCTAACA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00351	Biopterin_H	Biopterin-dependent aromatic amino acid hydroxylase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001273	Family	Aromatic amino acid hydroxylase	Interproscan
IPR002912	Domain	ACT domain	Interproscan
IPR018301	Binding_site	Aromatic amino acid hydroxylase, iron/copper binding site	Interproscan
IPR019773	Family	Tyrosine 3-monooxygenase-like	Interproscan
IPR019774	Domain	Aromatic amino acid hydroxylase, C-terminal	Interproscan
IPR036329	Homologous_superfamily	Aromatic amino acid monoxygenase, C-terminal domain superfamily	Interproscan
IPR036951	Homologous_superfamily	Aromatic amino acid hydroxylase superfamily	Interproscan
IPR045865	Homologous_superfamily	ACT-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11473	AROMATIC AMINO ACID HYDROXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004497	Molecular Function	monooxygenase activity	Interproscan
GO:0004510	Molecular Function	tryptophan 5-monooxygenase activity	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0009072	Biological Process	aromatic amino acid metabolic process	Interproscan
GO:0016714	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen	Interproscan
GO:0043005	Cellular Component	neuron projection	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-