| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s002.g0432.t1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA | Lsat_scaffold002 | 11350736 | 11373450 | + |
| CDS | |||||
| Lsat_s002.g0432.t1 | |||||
| Transcript |
| Lsat_s002.g0432.t1 |
| Protein |
| Lsat_s002.g0432.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00989 | PAS | PAS fold | Domain | Interproscan |
| PF08447 | PAS_3 | PAS fold | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000014 | Domain | PAS domain | Interproscan |
| IPR001610 | Repeat | PAC motif | Interproscan |
| IPR013655 | Domain | PAS fold-3 | Interproscan |
| IPR013767 | Domain | PAS fold | Interproscan |
| IPR035965 | Homologous_superfamily | PAS domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23043 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000977 | Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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