| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s001.g0639.t1 | RNA BINDING MOTIF RBM PROTEIN -RELATED | Lsat_scaffold001 | 17074809 | 17081987 | - |
| CDS | |||||
| Lsat_s001.g0639.t1 | |||||
| Transcript |
| Lsat_s001.g0639.t1 |
| Protein |
| Lsat_s001.g0639.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR052285 | Family | Nuclear exosome targeting complex subunit | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13798 | RNA BINDING MOTIF RBM PROTEIN -RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000381 | Biological Process | regulation of alternative mRNA splicing, via spliceosome | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003727 | Molecular Function | single-stranded RNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
