Gene detail

Detailed information of Lsat_s001.g0599.t1 in Lamellibrachia satsuma Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Lsat_s001.g0599.t1	ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT	Lsat_scaffold001	15021326	15033040	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Lsat_s001.g0599.t1

GTACTTAGGAAGCAGCTACACCCAACAGTTGGCACGCCGCCTAGCGAGAAAAGATGCTTTGGTAGGAATCGTTTCTAACTAAATCCGTATGTTTGTGTGATCTTCGCTAACTTGTGGTAACAAATATGTCGATGAGGGTGCTTGTAGCGTGTAAGCGCGTCATTGATTATGCTGTTAAGGTGAGGGTGAAGCCAGACAAGACTGGGGTTGTCACAGAGGGTGTGAAACACAGCATGAACCCCTTTGATGAAATTGCAGTTGAGGAGGCTGTAAGGATGAAGGAAAACAAGATTGCTAGTGAATTAGTTGCTGTATCTTGTGGCCCAAAACAGTGCCAGGAGACATTGAGAACAGCACTGGCAATGGGCATCGACCGAGCCATCCATGTGGAAGTCAGTGATGCGGACTTTGCAAACATGCAGCCATTCCATGTCTCCAAGATTCTGGCCATGGTCACACAGGAAGAGAAGGCAGATGTCCTCATTCTCGGAAAACAGGCTATTGACGATGACTGCAATCAAACAGGACAGATGACAGCTGCCTTGCTAGATTGGCCACAAGCAACCTTTGCATCTGCTATAAAGGCAAAGGAAGGGGAGCTATTGGTGACACGTGAGGTGGATGGCGGTCTTGAACACATCCAAGTGAAGACACCTGCTGTTGTCACGACTGACCTGCGACTCAATGAACCACGTTATGCCACCCTGCCCAACATCATGAAGGCAAAGAAGAAGCCACTGGTGAAGAAGGCCGTGGCAGACTTTGGGGTTGACCTGACGCCCCGCCACCAGGTGCTGAGTGTGGAGGAGCCCCCCACCAGGGAGGCAGGCCACAAGGTGGAGACTGTTGAGGAGCTGGTCGGCAAGCTGAAGGAGGCTGGGGTTGTATAGATGACGCCACAGTGACTTGGATGCATTGTGAAAGGGGTGTGTTGTGACTATGCTCAATCCACAGTGTGAACTAACTGGTGGGACACAAACCTAAGTATGTCTACTTAACTGTGTTTCTGCATTTTACTTAGATTTGTTTATTAATGGCTCGTATTTACGTAGAACTGTGATGTGATTTAATGAGGCATGGGTGACAGAGCCTGTAGAAGACATCTCATTGCAGACATCTCATGAATAATTGCTTTACCAAATAATATATATCATTAAGGATTTTGATTAATGTTTAACGATCATGTTGTTAAATTTAGTAGTCAATATATTATTGGTTGGCAATCTGCCATCTTGTAGTCTGCCATGTGTTCCACCATTGGCACAGCCATGTGCTCTACTGTGTGTTCTGCAATGTGTTTTGCCATGTGCTCTGCCATGTTTTTATCATGAGCTCCACTGTGTGTTCCATCATGTCTTACCATGTCCTCTACTAGTCGTTATGGTATGCAGCATTCCAGGAGGGTTTAGTCGATTATATGCAAATAAATTTCTGCCTAAAAACATGTCACAAACTGATCTCATTTCAAACATTGTGCTGATTTTATGGAGCACCATTTTGGCAAAATGGTTCCTGAGTCAATTTTCACCAGAGCATGACATTTTGTTATTATGTATGCGATGCATGTTCAAAATGACTGAATGTAGTTTGTGCTGGCATATGTATGTGATTGACTGTGTCTCTTCCAGCAATCATTTATCACAGTCAATGGTCGTACTTCAAGCTTTCTCAACTACTGCTGTACCAACTGATAAGCAAATGTTCAAGATGAATTGCAAACGGGTAATTTGCGAAAATAAAACAAATCAGTATTATACGTGTTGTTTGTTACAAGTGGTTCATTGTCAGAAACCTCGCGTGTGTCACACATTGCATGGTGTCGGATTAAAATAGAAAATATATATAGTTGTCATATGTCTAAATCAGCCACATTTTTTAACTGGCAACTCCTTCACCAACAAAGCGAATGAAATGCACCAACAAATTTCAGAACAACTTAATGATACAAGATTTTACAGATTTATATGTAATTTGTAGTCACAAATACGATTTTGGTCAAAACAAATGTAGCATGTTTGCTCAAATACCCATACATGTCTGTAGCTAACTGCTTTATGTGTGATTCCACTCCATTGGCACTTGAATGAAACAGTAGTACATGTTTTCTTATATAAATCTACCTACATCACTTTCCATAACCATTACACCAGTTACCTGTCGTTGTGTAATGGTGCACAGTGAAATCAATGCCACATTTACCCATACAACTTAGCAGCACATAAAATGTGCTCAACCCGGTTGTATTATTTACAAACATTAGGTTTGTAAACATTATTTTTTAACTTGGTAAATACATATACAAAATAGTTATTCAAGTCTCCTTTACCACATAGTATAACACA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01012	ETF	Electron transfer flavoprotein domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000049	Conserved_site	Electron transfer flavoprotein, beta-subunit, conserved site	Interproscan
IPR012255	Family	Electron transfer flavoprotein, beta subunit	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR014730	Domain	Electron transfer flavoprotein, alpha/beta-subunit, N-terminal	Interproscan
IPR033948	Domain	Electron transfer flavoprotein, beta subunit, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21294	ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0009055	Molecular Function	electron transfer activity	Interproscan
GO:0009063	Biological Process	amino acid catabolic process	Interproscan
GO:0033539	Biological Process	fatty acid beta-oxidation using acyl-CoA dehydrogenase	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-