Detailed information of Lsat_s001.g0560.t1 in Lamellibrachia satsuma Gene info
Gene IDAnnotationScaffoldStartEndStrand
Lsat_s001.g0560.t1PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDLsat_scaffold0011415182414172682-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0002142Cellular Componentstereocilia ankle link complexInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0032426Cellular Componentstereocilium tipInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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