| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Lsat_s001.g0492.t1 | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 | Lsat_scaffold001 | 12570426 | 12604700 | + |
| CDS | |||||
| Lsat_s001.g0492.t1 | |||||
| Transcript |
| Lsat_s001.g0492.t1 |
| Protein |
| Lsat_s001.g0492.t1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04129 | Vps52_CC | Vps52/Sac2 family, coiled-coil | Repeat | Interproscan |
| PF20655 | Vps52_C | Vps52, C-terminal | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007258 | Family | Vps52 | Interproscan |
| IPR048319 | Domain | Vps52, coiled-coil domain | Interproscan |
| IPR048361 | Domain | Vps52, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14190 | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000938 | Cellular Component | GARP complex | Interproscan |
| GO:0006896 | Biological Process | Golgi to vacuole transport | Interproscan |
| GO:0007041 | Biological Process | lysosomal transport | Interproscan |
| GO:0019905 | Molecular Function | syntaxin binding | Interproscan |
| GO:0032456 | Biological Process | endocytic recycling | Interproscan |
| GO:0042147 | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
