Gene detail

Detailed information of Lsat_s001.g0189.t1 in Lamellibrachia satsuma Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Lsat_s001.g0189.t1	MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B	Lsat_scaffold001	4606212	4629736	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Lsat_s001.g0189.t1

ATGATGCTTAGGCTTGGTTGTGATGCAGCGTGAGGTTTATTAATTATAACATCTCCATTGTTAGCTTGTGTGACCAAGCCTTCGACTCCAAAACATGCCACGACAGGCCCCGGATAGAAGCCTATCTCCTCCGCCAGGATTTTGTCTACTTCCCAGTATTGAGACGTCGCCAGCGAGAAGGAATACAGCGTACAAATTATTTATCTTGGTCTTCACATTCCTCGCATACACAACATTCCATTTATCAAGGAAGCCGATCAGCGTTGTTAAGAATGTACTTCATCAGAATTGCTCCTCGACAAACCCTAACTGCAGTAGCTGGGTGCCGTTTGATCAGCCTAACTACAATGAACTGCTGGGGAGTCTTGACTATGCATTCCTGTTTGCGTATGCAATTGGCATGTTTCTCAGCGGCCACCTGGCAGAACGGCTGAATCTGCGCTACTTCCTGTGCGGAGGGATGCTGCTCAGTGGTTTGTTCACGGCCCTCTTTGGACTCGCAAGATACTGGAAGATCCACTCACTTTCGTACTTCATTGTTGTCCAGGTCTTTGGCGGACTGGTGCAATCATCTGGCTGGCCCAGCGTGGTCACTTGTGTTGCCAATTGGAATGGTAAAGGAAATCGCGGTGTCATCATGGGCATCTGGAACTCACACACGTCAGTGGGCAACATTCTGGGGTCTCTCATATCTGGGGCCTTCGTCAACGACAACTGGGGTCTATCATTCATCGTCCCTGGGGCCATCATAGCTGCTATGGGAATACTTACTTTTCTCTTCCTTGTACCAAAACCCGAGGACGTCGGATGTCCAAACCCGAACAAGATCACTCTACCAGACATCGAGACTCCAGGCAGCATTCAGGAGAAGGATAGTCTAGACATAAAGGACGAAGATTCAGAGACCACCCCCATCCTTGAAGGCCAACACCAGGAGAAGCCAGTTACATTCATGAGAGCCCTTAAAATCCCGGGCGTCATTGAGTTCTCTCTCTGCCTCTTCTTTGCCAAGTTGGTCAGCTATACATTCCTCTTCTGGTTGCCGAGCTACATCAAAAGTACCAGTCCACACATGCACAACATGGAACAAGCTGCTGACCTTTCCACATTCTTTGACATGGGCGGAATAGTAGGTGGCGTTGCTGCAGGTGTCATATCTGATCGGACGGGAGGTCGTGCTTCCATCTGTCTTGTGATGTTGTTCCTTGCTGCCCCGATGATGTTTGTTTATCAACACTTTGGACACTTTAGCAGCAGTCTTAATATAGGGTTGTTGCTGTCTTGTGGGGCGCTGGTGAATGGGCCATACGCCCTCATCACCACGGCAGTGTCAGCTGATCTAGGCACCCACCCACAGTTGCAGGGTAACGCCCTGGCCCTTGCTACTGTCACAGCTATCATTGACGGAACGGGCTCCATGGGTGCTGCCCTGGGCCCCCTGCTCACTGGCCTCATCACCCCGTATGGCTGGCAGAACGTCTTCTTCATGCTCATAGCTGCTGACCTCTGCGCCTTACTGTTGCTGATACGCCTTGTCATTCGCGAGGTCTTGTTGTGGGTGCGACATTCCCGCCGATGACCTCCACCATCCAAGGAACGTGTCAAAGGTCACAGCGAATACATGGCAACCTGAACACTTCCAAGGGACATTTTGGCATGAACCTTTTGAAACGAAACGAGACTTTGTATTTGTGAACATGACATAATACTGCTTTAGCAAAAAAAAATTTATTGTTTAGAATTATTTCTGGGAAGACCTGAACATTTCTGGGTCATTGATGAATTATGTCAGTATTATGAAATATTAATGATTTAAAATTAGTTAAGAATGTGTTTTGGCAGATCTAGAAATAGTGATCTTAGAATGGCCAAGTGTGCTAGTTTTATAGTTAATGGTTGTCATGTTGAGTTATGGTCTTTGAGCGTTGTTTTCTATGTTTTTTAATTATATATCTGTGCAGATGTTTAATATCTGTTTGCACTTCCACAAGCCAGGGCAACAGAATGGAGACGGGTGCTAGAGGGGCAGAAAACAACATTTATTTCCTGGCAAAGTTAGGACCATGGGATTAAACAATTAGGACCACTGGATTATACAGTTAGGACCATGAGATTAAACAGTTAGGACCATGGGATTAAACAGTTAGGACCATGGGATTACACAGTTAGGACGATGGGATTAAACAGTTAGGACCACTGGATTAGTGTTAGGACCACAGGATTAAACAGTGAGGCCCATGGGATAGGGATAAAACAGTTAGGATCATGGGATTAAACAGTTAGGACGATGGGATTAAACAGTTAGGCCCACGTAATTAAACA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000849	Family	Sugar phosphate transporter	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43184	MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0015760	Biological Process	glucose-6-phosphate transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0030176	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0035435	Biological Process	phosphate ion transmembrane transport	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0061513	Molecular Function	glucose 6-phosphate:phosphate antiporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-