| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| LLU|FUN_040158-T1 | PRE-MRNA SPLICING FACTOR | scaffold_964 | 137590 | 151826 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13432 | TPR_16 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF14559 | TPR_19 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR045075 | Family | Pre-mRNA-splicing factor Syf1-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11246 | PRE-MRNA SPLICING FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000244 | Biological Process | spliceosomal tri-snRNP complex assembly | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0046540 | Cellular Component | U4/U6 x U5 tri-snRNP complex | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
