Detailed information of LLU|FUN_039962-T1 in Lamellibrachia luymesi Gene info
Gene IDAnnotationScaffoldStartEndStrand
LLU|FUN_039962-T1SEC63 DOMAIN-CONTAININGscaffold_954115616132856-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF02889Sec63Sec63 Brl domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR004179DomainSec63 domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR014756Homologous_superfamilyImmunoglobulin E-setInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24075SEC63 DOMAIN-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000388Biological Processspliceosome conformational change to release U4 (or U4atac) and U1 (or U11)Interproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003724Molecular FunctionRNA helicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP