| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| LLU|FUN_039961-T1 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN | scaffold_954 | 97011 | 107961 | - |
| CDS | |||||
| null |
| Transcript |
| null |
| Protein |
| null |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF01661 | Macro | Macro domain | Domain | Interproscan |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR002589 | Domain | Macro domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR027370 | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR043472 | Homologous_superfamily | Macro domain-like | Interproscan |
| IPR052056 | Family | Mono-ADP-ribosyltransferase ARTD/PARP | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14453 | PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003714 | Molecular Function | transcription corepressor activity | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003950 | Molecular Function | NAD+-protein poly-ADP-ribosyltransferase activity | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0010629 | Biological Process | negative regulation of gene expression | Interproscan |
| GO:0070212 | Biological Process | protein poly-ADP-ribosylation | Interproscan |
| GO:0140289 | Biological Process | obsolete protein mono-ADP-ribosylation | Interproscan |
| GO:1990404 | Molecular Function | NAD+-protein ADP-ribosyltransferase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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