Gene detail

Detailed information of LLU|FUN_032018-T1 in Lamellibrachia luymesi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
LLU\|FUN_032018-T1	AGAP011099-PA	scaffold_64	776811	819856	+

Gene Structure

More details in Jbrowse Sequence

CDS

LLU|FUN_032018-T1

ATGCGCGATCTACACAGCGACGTGGTCCCATTCAGAGACCTTCCCGACCCAACAAACCTGTGGGATTTACAGGGAAAGATTGGGGAAGGGACATATGGCACAGTGTACAGAGCAAAACAGAGAGACACAGGTCAAGAGGTCGCCATCAAGGTGCTGGAGTCGGTCGATGAAATACTTGATGAAGTTGAGCAGGAATATGTCATACTAAGGGACTTCAGTAACCACGCCAACATACCTCAGTTCTATGGTCTCTTCTTGAAGCCAGACCCAAAGCAGGACCAACTCTGGATCACAATGGAGCTATGCTCTGGAGGGTCTGTCACTGAATTGGTGAAGGCTCGACTGCAGAAAGGCCACAGGATGGATGAGCATGTCATAGCTCACATACTCAAGGAAACCATGAAGGGCCTTCAGCATCTACATGAGCATCACGTGATGCATCGAGATGTCAAAGGTCACAACATACTTCTCACTCAGGATGGCAAAGTGAAACTCATTGACTTTGGAGTGTCAAGAAAGTTGAAGAATACTCAGGACCAATGTTGTACCTCACTAGGCACCCCTTTCTGGATGGCTCCTGAGGTGATCGCCTGTGAACAGCAGGTGGACACAAACTACGATATACGCTGTGACATCTGGTCACTAGGTATCACTGCCATCGAGCTGGCAGATGGAGACCCACCATTGGCTGATCTTCATCCAATGAGAGCTCTCTTCAAAATACCAAGGAACCCTGCACCATCGGTAAGGAAGAAGGACGATTGGTCCAGAAACTTCCTCCACTTCATTGACAGGTGTGTGCAGAAGTACTATGAGAAGCGACCGTATCTGAGTGAATTGTTTTGTCATCCCTTCATCACCCAAGTGCCACAAAATACAACCAAGATAAAGGCAACTCTGCAGGACTTGATGAGGAGGACAGAGGGCGCTGTACATGAACCGCAGGCGACGGTGAAACATGGGCAACTGCGCATGAGGCACCAGATGGATTCAGTATCAGCAGTCGACGACCTCGCCACACTCGAGGCTCTGGACAAGGGGATGATCGTTGATCATCTGGAACGACGTTACAACAACTCCCTCATCTACACATACATTGGGGACATCCTTCTGGCTGTTAACCCTTTCAACCCCCTCACTATCTACACTGAACAGTACTCGAGGCTGTATCTTCACTCTGCCAAGGCCGATCACCCGCCACACATCTTTGCCATGGCAGACCAGACCTACCAGGCCATGGTTCACGGCAGGTGTAACCAGTGCATCGTCATCAGTGGTGAGTCTGGGGCGGGGAAGACGGAGAGCGCCAACTTCCTGGTCCAGCAACTGACACAACTTGGCAGGGCCCCAAACCGGGATCTTGAGGAGCGCATTCTACAAGTAAATCCCTTGATGGAGGCATTCGGAAACGCACAGACTGTCATCAACAGTAACTCTAGTCGATTTGGGAAATATCTTGAGATGACCTTCACTGGCAGTGGCAAGGTTACAGGAGCTCGACTGTCTGAGTACCTTCTTGAAAGATCAAGAGTGGTCAATCATGCGAAAGGAGAGACAAATTTTCACGTGTTCTACTATCTTTATGACGGGCTCGTCGGCAGTGAGAAGGCTGCCAGATATTACTTGACCGAAAAAGTCAACTACAGGTATTTGGGTAGCAATCGTGGCCATGGATGTGCCCTTGATGTTCGAACTGCGACTGCTAGCAAGAACAAGTGCAAAACGATTCAGAGATGCTTCGAGATTATAGGATTCCGAACTCAGGAAGTGAGTGCCATCTTCAGCATCCTCTCTGCTATTCTGCACATTGGAAACGTCGACTTTCTGGAGAAAGAAGTAAAACATCAAACGACGACCATCATTGGAGACACAGACTTAATTCAGATCGTGGCTGAGTTGCTTGGTGTGGACGCGCGAGAGCTACGTGTGTCTCTGACCACGTCCAGCATGGTGGCACGAGGTGAGATGATTGTCCGACACAACTCAGTGACCGAATGTATCGACTGTCGCGATGCGCTCTCTAAGGAAATCTACGGACGCATCTTCTGCTGGCTGGTCAACCAGGTCAATGACCTCCTGCGGCCATCTCACAGCAACGAGGACAGTACTGAGAGTCTCACCGTTGGAATTCTGGACATTTTCGGTTTTGAGAACTTTGAGCGTAACTCATTTGAGCAACTGTGCATTAACATTGCCAATGAACAGATCCAGTACTATTTCAACCAACACGTTTTCGCATGGGAACAGCAAGAATACAAGAATGAGGGCATTGATGCAACCGAAATCAAGTTTGTTGACAATCGGCCCGTGTTGGACATGTTGCTGACGAAGCCAATGGGTCTTCTTGCACTGCTGGACGAGGAGAGTAACTTCCCCAAAGCAACAGATCTCACCCTTGTTGAGAAGTTTGGTCAGAACATTACATCGGACATCTTCAGTCGACCCAAGTCTCAGGGGCTTGTGTTCACCGTGCAACATTACGCAGGCAAGGTGGAGTATAGTGCAGCAGGTCTGCTCGAGAAGAACCGAGATCGGCTCGCACACGAAGTGATGAACATGCTACGGATATCACAGATCGCTCTAGTCAGGACTATATTCTGCTGCTCCGTCACAAAAACTGGAAATTTGGCCTCTGCCAGTGATTCTAATGGTGAAAGTTCATCTAGCTCATTCACATCCACCATATCCATCCGCAGCGCATCAAATGTTCACTCAAGTGCGACAAGCCAAGCTCGTATTCAGCAGACCGTGGCGACCTACTTTCGCTATTCACTGATGGACTTGCTCTCCAAGATGGTCGCTGGTGCACCACACTTTGTACGGTGTATCCGACCTAACACAGAGAACAGCCCTGGATACTTCGACCCGGAGAAAGTCGAGGTGCAGTTGAAGTACACTGGAGTACTGGAGACTACTCGCATCCGGAGACTGGGATTCTCCCACCGGATCCCCTTCTCCGAGTTCCTCAGGAGATATGCAATCCTTGGCCTGAGTCTGAGTGAACATCTGCCGGCAAACAAGGACACTTGTAAACAGCTGCTGGAACAAATAGGACTGGAGAATTGGGCTCTCGGCAACACAAAGGTGTTCCTCAAGTACTACCATGTTGACCTGTTGTGTCAACTGTTTGAGGCGAAGCAGAGATGTATCATCCGCGCACAGTCAGTTGTCCGCATGAGACTACAGCGCAAACACTACCTCCAGTACAAGGACAGGTTGTACAGTAGTGTTGTATGCATACAGAAAGTGATCAGGGGTCACCATGTGCGGAAGCAGCTCTACCTGGTGAGACAGAGACGTACCGCTGCCGCTGTGTTGATGCAGAAGATGGTTCGTGGCTTCCTGCAGCGGCGGAGCTACAAGATCCGTCGGGAGGTGACACTGCATAGTTGCGTCATCATACAGAGAGGTCTGCGAGGCTGGCTAGCGAGGATGCGTGTTCGTCGTCTCCGGATATCTCGACAGGCGGGACAGCAGAAGGCAGCAGTGGTGCTACAGTGCGGCATGAGAGCATGGCAGGCACGGAACCTGCGCAAAACTCTTGAGGGTCACAAGGCACAGTACATGGCGCAGACTGCGAAGTTTATGAAGCAGGTGAGGATGTCTGCTGCCAAGGTCTTCCTGTTGACGTCCAAGCACCAACTTCGACCCAAGCCCGTCACCAAACCCGAGCCCATGCCCAACTCGGAACTGTTCATGTTCTGGCCTGGCCAAAATGACACTGCAGCCACTGGTCAATCCATCAATGGTGTGACACCTCAGGCTAATGGTCGCATACGGTCTAGGGCCATGTCTCCTGTCGCTGTCCACCATCAGAGTGACCGGGTGGATGGACGTGGCAAGGCGAGTAAGGTTGCTTTAAGTGATGACCGATTGGACCATATCAAGAAGGCTCATGACATAAAGACACCATGGACGGAGAAAGATGCTGTCTACTATGACTCTATATCACAAGACAGCAATCACGAGAAACGTTTATGGGCAGAGGCAAACAGAGACTGCAGCAAAGGAGATACCAAGGCAGGTGGGGTTTGGGATGCTCCCCTTCAGGTGGCCAAGGAGAAAGCCATCAACGACATAAATCAACAGGAGAGGGAACTTGAACTACAGCGGGAGCTGGCGGAAGTTGACGAGATGTTTCGCAGTGTTCTTGCGGCTTCTGTGGCAGCAAAGTTCTTGGGCAGTGAGGATTCAGACAATGCTGACTCCGAGGATGAGAAGATGACAGGGGTGATGCGCAAGGATTCTGCACCCAAGCTGATGAATGGGCAGAAGGGAGACATGGAAGGGATTGTGGAAAAGAAGGAGCAGCAACAGGAATCTCACAAAAAGAAGTCATCTTCTAAACGTGACACAAGTCATGCAGATAACAACAACACCAGTACTAGTCAGTCAGAACATTGTGATGACACCACTGCACTTGATAAATGTGATGGTGAAGGAACAGTTAACTTTCGTTCACTCCTGCGCAAGACGAACTATGACCCGAAAAGTACACTACGACGACTAAATGCAAGCACCGATACGGTCAATCAGGTTGACTTCCGTGATGTGCTAAAGAGAAAGTCATCAGATGTCTCGAGAGCCAGGAAGACAACAGTTCAGCACGTCAGCTAG

Transcript

LLU|FUN_032018-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00063	Myosin_head	Myosin head (motor domain)	Domain	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00612	IQ	IQ calmodulin-binding motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000048	Binding_site	IQ motif, EF-hand binding site	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001609	Domain	Myosin head, motor domain	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036083	Domain	Class III myosin, motor domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR052409	Family	Myosin-III family with kinase activity	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46256	AGAP011099-PA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000146	Molecular Function	microfilament motor activity	Interproscan
GO:0003774	Molecular Function	cytoskeletal motor activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0016459	Cellular Component	myosin complex	Interproscan
GO:0018105	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0030832	Biological Process	regulation of actin filament length	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-