Detailed information of LLU|FUN_030346-T1 in Lamellibrachia luymesi Gene info
Gene IDAnnotationScaffoldStartEndStrand
LLU|FUN_030346-T1COLLAGEN ALPHAscaffold_5882165454482-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000001DomainKringleInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP