Gene detail

Detailed information of LLU|FUN_028715-T1 in Lamellibrachia luymesi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
LLU\|FUN_028715-T1	CENTROMERE PROTEIN E	scaffold_534	314653	368276	-

Gene Structure

More details in Jbrowse Sequence

CDS

LLU|FUN_028715-T1

ATGACCCGCTGTGTGTCGATGACCCAGTGTGTGTTGCCTACAGATCGTGTCTACGACCAAGTGAGCAGCACAGAAGAAGTCTACAATGATACGGCAGCTCCTATTGTCGAAGCAGCGATGCACGGTTTCCATGGGACATTATTTGCCTATGGACAGACGTCATCGGGGAAGACGCACACAATGACAGGAGACAAGGACTGCCCAGGAATTGTTCAGCTTGCTGTCGAAGACATCTTTAACACGATTGAAAATAGTCCGGAGCGGGAGTTCCTCATCCGAGTGTCATACCTTGAGATCTATCAGGAGAATGTGGTCGACCTGCTGGGAAATCTCGCCAAACACCTCGACATCAAGGAGAACTACCATGGCACTGTATTTGTGGAGAACCTTAAAGAGAACGTTGCGACCAGTGTCGAAGAAGTGATGACAGAAATGACGAAGGCAGAAGTTAACAGACATATCGGTGCTACAAAGATGAACGAACGAAGCAGTCGGTCACACACGATCTTCCGTGTGATAATTGAGAGTCACCTACGAACGGAGGAGTCAGTGAAATCAGATGACGTTGATGACGCGGTCATGGTAGCACATCTGAACTTTGTTGATCTGGCCGGCAGCGAGAACGCCAAACAGGCGGGGGCGAGTGGACAGCGACTGGCCGAGTCCGGCGCCATCAACAAGAGTCTCTTCAGTCTCAGTCTCGTTATTGGACAACTCAGCACCGGATCTACGTTCGTGAATTATCGGAACTCGCGTCTGACGAGAATTCTGCAGAACGCCCTCGGCGGAAATTCAAAGACAGCCATCATATGTACCATCAGTCCTGCGTCACTTGATCAGTCCATCTCTACGCTCAGGTTTGCGACGAGTGCGAAGTCTATAAAGAACAAGCCAGTGGTCAATGAGGTCATCTCTGGAGAGACGATGCTCAAGCGATATAAGAAGGAAATCCACGAGCTGAAGAAACAGTTGGAGGAGGCGAAGTGTGCATCGTCACACGTGCGCAGTGACATCGGCATGAGCCAGAGCAAAGAAGACAAGATCGAACTGCTGACTCGGCTCTTTTGTGTCAGTAGCCAGCTAGGGGGAGCCACTGGCACTAGGCGGAATGCCAGAAGCGAGGCGAGACGTCGAGAGACGTGGTGTCCAGGCCGAGGCGGGGTGCCACTGCCGCCATTTCTAGCAGCTCGTGGCGCCACCTATCCACAGCCTCTACTACCACCATCAATGCTTCCGCAGAATAAAGATGAGCCTTCTTCGCGTGAGTTCTGTTCTACTTCTACCGACAAGAGTTCTCCTGTGAAGACAGCGGAGAAGAATGTTGCAAGGAACAACAACGAGGCTGAGAAAGAACTGACCGTGGCCAGACAACGCATAGTTGAGCTCGAGTCGAGGGAGGCGGAATTGGTCGCTGCACATGACAAGGAATTATCTCGGCTGCAAGCTCAACTAGAATCGGGAAAAACTGAAGCTGAGAATGTACACAAGAGCCACCTGGATGAGATTGCCTGCATCACACAAAGTCGTGATGAAGCGGCGGAACAAGCAAAAGCTGTGAAAATGCAGATAATAGAGGTTCAGACATTTGGAAGAGACCTAATCTCCAACTACCAGCAGGAAATTGCTGATCTGGAAGCTCGGCTAGAATCTACAAAACTTGAAGTGGAACACATGTGTAAGAGCCACCTGGAGGAGATTGCCTGCCTCACTCAAAGTCGCGATGAAGCAGCAGAACAAGCCAAAACAGCAAAAATGCAGATAATTGAGGTTCAGACATTTGGAAAAGACCTCATCTCCAAATACCAGCAGGAAGTGGCTGATCTGGAAGCCGAATTAGAATCTGCAAAACTCGAAGCGGAACATAACTGTGAGCTCCACCTGGAGGACATTACGCGCCTCACAAAAGACTGCCATGAAGCGAATGAAGAACTTGAGGTGGCGAGGACACAGATAAGCGAGATGCAGACAATGGGGCGGGAGATGATCGCAAAACACCATCACCAGGTGGCGCTTCTTGAAGCTGACCTTGAAGCTGCCAGAGAAAAGCAGCCATGTGTCTCGTGTGAGCGCCACCTGGAGGAGATTTCCCATCTGACACAAAGTCGCGATGACGCCGTGGAAGACCTGGAGACTGCGAGATCAGAGATGGCTAAGATGAAAGCGATGGGCACCGAGATGATCCGGAATCTGCAGCAGCAAGTTGCAGAACTGGAAGCTGACCTGATATCAACGAGAGAGACGCAGGAGTCGGCCTCATCTGAGCTCCACCTAGCGAATATTGCACGCCTTAAACAAGACTGCCACGAAGCAGATGAAGAACTCGAGGCGGCGAGAACGCAGATAAGTGAGATGCAGACAATGGGGCAGGAGATGATCGCCAAACATCAACATCAGGTGGCGATACTTGAAGCCGAGCTAAAATCTACAAAGAAAGGCAGTGAAAACCACATCACACGTGAGATTTACGAGAAGGAGCGACAACGACTCATGCGGTGCTGCGACGAAGCAGACGATGAACTCGAGGCAGCCAAAAGGACACAAGCCACTTGGAATAGAGAGAAGGAGGGATTACTTGCGGAGGTAGACCAACTCAAACAGACCATCGCTCGGATACAAATAAAGAACACGATGCTGGAGAATGAATTGGTCCAGGTCCAGGACCCACACATCCGCAGGATTAAGTTCTTTGAGCAGGAACTGAATAGAGTGGTGACCGTCAACAAAACGTTGAAGAATGAAATACGAGATTTGCACAACAAGCAATCAAATGAGTCATTTCTGCAACCTCGGCAGATGAAAGTGTCTCAAAAGACGAACGAGTACGCAGAAGGGGAGAAGGAGTTTCGGCTGCAGGTTGAGGTCAAGAGGTTGTCGAAGAAGGTGGAAGCATTACAGGCTGCTCTTGATGCCCAGGGAAAGAAAAATACATTCTGCCCAGTAGCCCGAAGGTCATGGCCAAATATCGATGACGGCAGCTCCGGGAAGGACGGCGTGAGTTTAAGACAACAAACTAATGCGGCAACCTGCCGAAGAATGGCGTTCCAACTGGTTGCATCAAGTCGAACGCTGCTGTCAACGTCAGCACTAATACCAGGGTCCCTTCAGAGACAGGCTATGACAACACCACGACACATCTATAGGACAGCTGCAACATGTCGAAGACTCAAGTTGAGCAATTTCAGTAGCATTGGTCAGCATCGAAAGCACATCCACACAAGTTGTTGCCTACTGGGCCGCACTGATGCCACGGAGTCAATCTTGTGTGATCAGTGCGGGACTGTACAAAACAGGCGAGCGTCTGTCCAGACAAGACGACTGGACACGTCACCCCTCGGTCTGTTACCAGACTCGTATTCTGACCATCATGGGTCAAGCCATGTAATCTTCGCTTATCGACGTAATGGACGGCCGTCAGGAGGCGCCTACAAAAGTTATTTATTGTCACAATATACGCCACTCGCATGCACAAATCTAGACATTGTAGTTCGCATGTTGCACACGGAGGGCAGTGGTGGTCTGCGGAAGGACGAGTCAAAAGTCGAACAGACAGTGAATGTGCTTAAAAGTGAAATTGAAACAAAGAAAGGCGTAACAAAAGATGACTCGAAAGACCCCAGTGGTTTGGTCGCCACATTGAAAAAACAATCGACGCCAGATGTCGCAATGAAGGTTGAGAAAAGCACAGCAAGCTCCAGTTCAGTAGAGGTCACAACGGCACCACCAAAGAAGACGATTGTACAAAAGGTCGTTGCTGAACTGAAGCACTACTATAACGGCTTCAAGCTGCTCTTTATTGACGTCAACGTATGTCGGAAGTACATTTGGAGAGTACTTAACGGGCAGTCGCTGACAAGGCGAGAACGCAGACAGTTGGTGCGGACGACGGCGGACATGTTCCGACTTGTTCCCTTCCTCGTCTTCATCATCATTCCGTTCATGGAGTTCCTTCTTCCCGTCGCTCTCAAGCTCTTCCCAAGTATGCTTCCCAGCACCTTCCAGCAGGCGGACAAGAAGGTGGAGAAAGTGCGCAACCTTCTCAAGGTGAAGCTGGAGATGGCCAAGTTTCTTCAGGATACGATTGAAGAGACGGCCATACAACGCAAGGGTGCGAAGGGGGAATCGGCGCAACAGTTCGTTGAGTTCATGGAGAAGATCAGGACATCAGGGGAGCCGACATCCAACACAGAGATTATGAAGTACTCAAAGCTGTTCGAGGATGAGATCACCCTCGACAACCTCCAGTATCCCCAGCTCGTCGCCTTGTGTCGTCTGCTCGAGATTCCTACTGTCGGTCCATCCGTTCTACTTCGGTTCCAGCTGCAACTCAAACTGAGACAGCTCGAGGCTGACGATCTGATGATCCAGAAGGAAGGAATCGACTCGCTGGCAGAGTGGGAGCTTCAGGACGCGAGCAGGATGCGGGGCATGCGGTCGTTTGGCGTGCCAAAGACACGACTGAAGCTGCAGCTAGAGCAGTGGCTGGACCTGCATCTCAACGAGAAGATACCGGCCTCCCTGCTCCTCCTCTCCCGCACCCTCTACATCCCCGAGAGGCTGTCTCCCAGCGAGCAGCTCGTTGCCACCATCCGGGAACTTCCCAAGACCACGATGGAAGAGGCAAAAGTGAAGATCTCTGAGGTGTCTGGAGATCGCGTTGACAACAAGACGAAACTGGAGATCATTCAGAAGGAAGAGGAGGCCATTAGGGAGGAGATTGAGGAGAAGGTCATGTTGGAGGAGCAGGCAGAAAAACAGAGACAGGTCGAGACAACAGAATCTCTGGAGAAGCTAAGCATTACCCCCGAAGACATCAAACCAGTGCCGCCCTTGGCAGTTGAGACCCCTCAACCAGAGATTCCAGCCGATGAGTTGATGAAAGATATCGCACAACCTGTCATGGAAAAAAAAGACGAAGTCATGTACGACCTAGTGGAGGAGATCTCAAGCAAAGACCTGGAGCACTTGGAAGATGCGCTGGAGCATGTCGCAGATAAACAGATGGAACTGAAGCTGGAGCAACAGGAGCTTGCTGCTCTCAAGGAGGACGTCAATGAGTACAAAGAGGACCTGAAAGATCTGAAAGAAGTCATTGTGGCGACGGGAGCTGAAGAAAGTATCTTGCAAGAGTCAAAGGGGGCGACGCGTCTGTCGAAGCAGGTGGAGCGAATGATCTCTCAGATGGACACTGTCATGACCTCGCTGAACACTGAGAAAGACACGCTCCTCGAGAACATCGAAATGCAGGAGGTGAAAATCAAACGGAATCAGAAACTTCGTGATGATACAGATCTCCGTCAGACAGTGCTTGATAAAATCAGCGAAGAGAAGGAAGATCTTGTGAGTATCAACGAGCTGCTGCTTGCAATCCGTCGACTTCAGAAAGTGTCACATGACACTAAGCTGCAGAGAATCATGGAGGTTCTTGACCAGGACAAGGACGGTTGCATCGACATCAACAACGCGCTCAAGGTGATTGAACTGCTGGGTCGCGAGAACGTGAAGATCAGCCCACAGCAGATGGCAGACATCACAAAACTGCTGGAGGCAGAACAGAAAGTGGAGGAAGGTATCCAGAAAAGCAAACAGGAGAAACGGGCGGCTGAAGAACTTCAAGACTCTGACTCCATGAAAGAAAAATCATCGTCTGACAAGCAATGA

Transcript

LLU|FUN_028715-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan
PF07766	LETM1_RBD	LETM1-like, RBD	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001752	Domain	Kinesin motor domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR033122	Domain	LETM1-like, ribosome-binding domain	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000278	Biological Process	mitotic cell cycle	Interproscan
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005874	Cellular Component	microtubule	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-