Detailed information of LLU|FUN_026077-T1 in Lamellibrachia luymesi Gene info
Gene IDAnnotationScaffoldStartEndStrand
LLU|FUN_026077-T1EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDscaffold_46748185788937-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02148zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan
PF08976EF-hand_11EF-hand domainDomainInterproscan
PF13499EF-hand_7EF-hand domain pairDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR001607DomainZinc finger, UBP-typeInterproscan
IPR002048DomainEF-hand domainInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR015070DomainDJBP, EF-hand domainInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR033809FamilyUSP39Interproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR052603FamilyEF-hand calcium-binding domain-containing protein 6Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR20875EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000245Biological Processspliceosomal complex assemblyInterproscan
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0006397Biological ProcessmRNA processingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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