| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| LLU|FUN_024872-T1 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | scaffold_4270 | 9 | 10136 | + |
| CDS | |||||
| LLU|FUN_024872-T1 | |||||
| Transcript |
| LLU|FUN_024872-T1 |
| Protein |
| LLU|FUN_024872-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000629 | Conserved_site | ATP-dependent RNA helicase DEAD-box, conserved site | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47960 | DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003729 | Molecular Function | mRNA binding | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0010494 | Cellular Component | cytoplasmic stress granule | Interproscan |
| GO:0017148 | Biological Process | negative regulation of translation | Interproscan |
| GO:0033962 | Biological Process | P-body assembly | Interproscan |
| GO:0034063 | Biological Process | stress granule assembly | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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