Gene detail

Detailed information of LLU|FUN_006644-T1 in Lamellibrachia luymesi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
LLU\|FUN_006644-T1	MUCIN-22	scaffold_1398	4582	95971	-

Gene Structure

More details in Jbrowse Sequence

CDS

LLU|FUN_006644-T1

GATTGGACTGCAAAACTGATAATGAACCGTTCGCTGGCGCCGATGCCCCAGAAATGGAGACAGACCAAAAAGACAGACATCGCGATGGAACCGAATCTCAAGAGTTTGTGGGTGGGCAGCATCCGGCGTGGAGTGACGAAGGACATGCTGCGCAAATTGTTCTTGGAGTATGGAGACATTGCAAATGTGCAGTATTTGCAAATAAAATGCTATGCTTTTATCCATTTTGTGACAAAACAGAGTGTTGAAAAGGCCATAGATGCGTTTCAGATGCAGTCTTGTCGTCTTGACCCCGACCTAGCTGCTGACCTTCAGAACAGAAAGCAGAGTTCCAAGATGGAGAAAATGCACGAACAGAACCTATATAAGCACTGGAAGAGGTTCATCAAAAAGTTGGTTGTGGATGATAAGCTACTCGCCATTCTAGAAACAAATGGCGCACTCATGAAAAAAACAGTGAAAACAATGCAGATGGAACAGCTACGTATGACAAAACGCACGAGGCCACAACAATTGCTGTATTTGTTGCCAAGACGAGCCCCAAAGTCATTCACCCTATTTGTTGAGGCGTTAGTAGAAACTGACCAACAACACCTGGCAGTACTTCTTGACCCCGACCCAGCTGACCCCGACCTTCAGAAGAGAAAGCAGAACACTACAACACTGTCTGCTGATGGGACAGACACTACGACAATGTCTGCTGATGCGACAGACACTACGACGCCGTCTACTGCTGGGACAGACACTACGACACCGTCTGCTGATGGAACAGACACTACGACACCGTCTGCTGATGGGACAGACACTACGACACCGTCTGCTGATGGGACAGACACTACGACACCGTCTGCTGATGGGACAGACACTGCAACACCGTCTACGGCTGGGTCAGAGGAAGCCCAATGTCTGAGGAAGCCTTTTGAAGAAGAGAAGGAGCATCCACTCTCTGAAGAGTCATGCACTACACCACCATCTGGGTCAGACACTACGACACCGTCTGCTGGTGGATCAGACACTATGACACCGTCTGCTGATGGATCAGACACTACGACACCGTCTGCTGGTGGGTCAGACACTACGACACCGTCTGCTGGTGGGTCAGACACTACGACACCGTCTGCTGGTGGATCAGACACTACGACACCGTCTGCTGGTGGGTCAGACACAAAGACACCATCTGCTGGTGGGTCAGACACAACTACACCGTCTGCTGGTGGGTCAGACACAAAGACACCATCTGCTGGTGGGTCAGACACAACGACACCATCTACTGCTGGACCAGACTCTACGACACAGTCTGTTGATTCGTCGACTGCACCTGTGTCACTGGTGAATCCCAAAAGTGACCGCCCTGAAAAGGTAGAAGGAGAGCTCCACCCTGACAAAGAGCAAGCTCGAACGTCAACGAAGGGTCATCTAGAGGAAAGTAAAGCAGAAGGACCACTGTGTAACGACTTTCTCCTTAATCTTGCTGAAGAGATCGACGCGCCACTAAGGTCCTCACTAGATACACGGCAGTTTCAACTAGGCTTAGAGTTGGACATTGATCGTTCCACATTAAACAACATAATGCGTGAATTCTCATGGAGTAGGACATTCGCTATACTCAAGGTGTGGAGAAACAAAAGATGTAATTTGGACAGTTCCAATGAAATGATCCGTGGACTATGTGCAGCTCTTTCAAAACTTGAGAGGACAGATCTTGTGAAGTACATTCAGCATGAGCAAGCCCCGGATCCTAGTGACACAGATTCACAAAGTCTGAAGTTCAGAGCGAAAGAACCATTCCACAACAAGGTTCTTCTTCATCTGGCTGAGGAGATGGACAAAGAACAGGTTCAACCAGGATCATCATTAGATGCACGACAGTTTCGACTAGGAACATTGTTGGGCCTCAGATACGCCACACTGCAACACATAATGGATGAACCTGTGACCGAGTGGAGTAAGACATTCGTCATCCTCAAGATGTGGAGAGATAGAACATGGAATTTGGACAGTTCCTGTGAGATGGTTACGAGTCTCTGTGAAACTCTTTCGGAACTTCAGAGAGATGACCTTGCAAAGTACATTCAAGATGAACAAGCCAAACATCCTAGAGAGAGAATTTTGCGATGCCAGGAAGCTGAAGCCAAAGTGTGTAATGACCGTCGATATTGGAACTTTCAAGTCGGCCCTGAAGGTGCCAGCATTCGTGTGAGAAATGTCTCTGTGACAATTCCAGAAAACGCACTTAAGAAAAAAATCATCATCACCATAGTGATCAGTAGCAACAAATCAGATGAGCCCAAGAAAGAGGGTCAGTATTTTGTTGGGCCGGTTGTCTACTGCCTGCCACATGGTCTGCGCTTCAAAGAGTCAGTCAAACTCTCGATTGACTACGATCTGGAAGCCATGCCATCAGCATCCAAAATGCAAATGTTGTACAGTGAGACTGATGTGAATGAAGAGCTAGAATGGAAGACACATGATTCGTCCTGTACTGTTGATGGGTCGACAGGACAATGCAGCATTGATATCCAACACTTCTGCGCATTCACAACATCAAATGATGATGGGTCAGACGCTACGACAGCAAATGATGAAGGGTCAGATGCTACGACAGCAAATGATGAAGGGTCAGACGCTACGACAGCAAATGATGATGGGTCAGACGCTACGACAGCAAATGATGATAGGTCAGACCCTACGACAGCAAATGATGATGGGTCAGATGCTACGACAGCAAATGATGATGGGTCAGACGTTACGATAGCAAATGATGAAGGGTCAGACGCTACGACACCAATTTATGATGAGTCACACTTCACAACACTGAAGACTAATGGATCAAATGGTACAACACCAAAGACTAATGGATCAAATGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGACGGATCAGACGGTACAACACCAAAGGCTGACGGATCAGACGGTACAACACCAAAGGCTGACGGATCAGACGGTACAGCACCAAAGGTTGACGGATCAGACGGTGCAACACCAAAGGCTGACGGATCAGACGGTGCAACACCAAAGGCTGACGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACGGTGCAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACAGTGCAACACCAAAGGCTGATGGATCAGATGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCACAATATGAATGGAACGCTCAAAGCAAGAAATGGAAATCCAAATTCAAAGAGCTTGTTGAACTTTTAAAAAGCTCATTAGATAAATTCGTCAGTAAACTGGACATCAAAGTCTGCTGCAAAAAAGAAAGAAAAAAAAATGATTTCAAGATTGGCAAAGGGACTAGTGGAACGATCGTGTATCTAGGCTTTTACAAAGCTGATTTCTGCAAAGTTCTGATAGAAGGGGCTGTGAAAAAGGTGCCTACAATGGACCACCCAGAAAGGAAGAAAGAACATGAAATTCTCTTGGGGTTGCAGGACAATAACATTGTGCATTTTATGCGTGCAGAGTGTGCGGATGATGGTGGGATGTACATGGTCTTCAGGCTGTGTGATTTCACCCTCACTGGTTGGGTCAATCACAATAAAAGCAGAAGATGTTGGAGAAGCTCAAGTGATATGATCATACAGCTTCTACAAGCACTGGAGTTTCTTCATCGAAATAACGTTTTGCACTGCGACGTAACTCCTGATAACATATTAGTGATGGAAGATCAAACGCTGAAGTTGGGTGATTTTGGACTCAGTCGAAGATTCGTGGATGGCCGTAGCAACGGGGTTCCAGCAGGCACACCAGGCTGGAAAGCAAAAGAAGTGCTTGACTGCCAGCCAGGAGATGACGTCAGGTACACACCGTTCACTGACATCCAG

Transcript

LLU|FUN_006644-T1

AGGATTGGACTGCAAAACTGATAATGAACCGTTCGCTGGCGCCGATGCCCCAGAAATGGAGACAGACCAAAAAGACAGACATCGCGATGGAACCGAATCTCAAGAGTTTGTGGGTGGGCAGCATCCGGCGTGGAGTGACGAAGGACATGCTGCGCAAATTGTTCTTGGAGTATGGAGACATTGCAAATGTGCAGTATTTGCAAATAAAATGCTATGCTTTTATCCATTTTGTGACAAAACAGAGTGTTGAAAAGGCCATAGATGCGTTTCAGATGCAGTCTTGTCGTCTTGACCCCGACCTAGCTGCTGACCTTCAGAACAGAAAGCAGAGTTCCAAGATGGAGAAAATGCACGAACAGAACCTATATAAGCACTGGAAGAGGTTCATCAAAAAGTTGGTTGTGGATGATAAGCTACTCGCCATTCTAGAAACAAATGGCGCACTCATGAAAAAAACAGTGAAAACAATGCAGATGGAACAGCTACGTATGACAAAACGCACGAGGCCACAACAATTGCTGTATTTGTTGCCAAGACGAGCCCCAAAGTCATTCACCCTATTTGTTGAGGCGTTAGTAGAAACTGACCAACAACACCTGGCAGTACTTCTTGACCCCGACCCAGCTGACCCCGACCTTCAGAAGAGAAAGCAGAACACTACAACACTGTCTGCTGATGGGACAGACACTACGACAATGTCTGCTGATGCGACAGACACTACGACGCCGTCTACTGCTGGGACAGACACTACGACACCGTCTGCTGATGGAACAGACACTACGACACCGTCTGCTGATGGGACAGACACTACGACACCGTCTGCTGATGGGACAGACACTACGACACCGTCTGCTGATGGGACAGACACTGCAACACCGTCTACGGCTGGGTCAGAGGAAGCCCAATGTCTGAGGAAGCCTTTTGAAGAAGAGAAGGAGCATCCACTCTCTGAAGAGTCATGCACTACACCACCATCTGGGTCAGACACTACGACACCGTCTGCTGGTGGATCAGACACTATGACACCGTCTGCTGATGGATCAGACACTACGACACCGTCTGCTGGTGGGTCAGACACTACGACACCGTCTGCTGGTGGGTCAGACACTACGACACCGTCTGCTGGTGGATCAGACACTACGACACCGTCTGCTGGTGGGTCAGACACAAAGACACCATCTGCTGGTGGGTCAGACACAACTACACCGTCTGCTGGTGGGTCAGACACAAAGACACCATCTGCTGGTGGGTCAGACACAACGACACCATCTACTGCTGGACCAGACTCTACGACACAGTCTGTTGATTCGTCGACTGCACCTGTGTCACTGGTGAATCCCAAAAGTGACCGCCCTGAAAAGGTAGAAGGAGAGCTCCACCCTGACAAAGAGCAAGCTCGAACGTCAACGAAGGGTCATCTAGAGGAAAGTAAAGCAGAAGGACCACTGTGTAACGACTTTCTCCTTAATCTTGCTGAAGAGATCGACGCGCCACTAAGGTCCTCACTAGATACACGGCAGTTTCAACTAGGCTTAGAGTTGGACATTGATCGTTCCACATTAAACAACATAATGCGTGAATTCTCATGGAGTAGGACATTCGCTATACTCAAGGTGTGGAGAAACAAAAGATGTAATTTGGACAGTTCCAATGAAATGATCCGTGGACTATGTGCAGCTCTTTCAAAACTTGAGAGGACAGATCTTGTGAAGTACATTCAGCATGAGCAAGCCCCGGATCCTAGTGACACAGATTCACAAAGTCTGAAGTTCAGAGCGAAAGAACCATTCCACAACAAGGTTCTTCTTCATCTGGCTGAGGAGATGGACAAAGAACAGGTTCAACCAGGATCATCATTAGATGCACGACAGTTTCGACTAGGAACATTGTTGGGCCTCAGATACGCCACACTGCAACACATAATGGATGAACCTGTGACCGAGTGGAGTAAGACATTCGTCATCCTCAAGATGTGGAGAGATAGAACATGGAATTTGGACAGTTCCTGTGAGATGGTTACGAGTCTCTGTGAAACTCTTTCGGAACTTCAGAGAGATGACCTTGCAAAGTACATTCAAGATGAACAAGCCAAACATCCTAGAGAGAGAATTTTGCGATGCCAGGAAGCTGAAGCCAAAGTGTGTAATGACCGTCGATATTGGAACTTTCAAGTCGGCCCTGAAGGTGCCAGCATTCGTGTGAGAAATGTCTCTGTGACAATTCCAGAAAACGCACTTAAGAAAAAAATCATCATCACCATAGTGATCAGTAGCAACAAATCAGATGAGCCCAAGAAAGAGGGTCAGTATTTTGTTGGGCCGGTTGTCTACTGCCTGCCACATGGTCTGCGCTTCAAAGAGTCAGTCAAACTCTCGATTGACTACGATCTGGAAGCCATGCCATCAGCATCCAAAATGCAAATGTTGTACAGTGAGACTGATGTGAATGAAGAGCTAGAATGGAAGACACATGATTCGTCCTGTACTGTTGATGGGTCGACAGGACAATGCAGCATTGATATCCAACACTTCTGCGCATTCACAACATCAAATGATGATGGGTCAGACGCTACGACAGCAAATGATGAAGGGTCAGATGCTACGACAGCAAATGATGAAGGGTCAGACGCTACGACAGCAAATGATGATGGGTCAGACGCTACGACAGCAAATGATGATAGGTCAGACCCTACGACAGCAAATGATGATGGGTCAGATGCTACGACAGCAAATGATGATGGGTCAGACGTTACGATAGCAAATGATGAAGGGTCAGACGCTACGACACCAATTTATGATGAGTCACACTTCACAACACTGAAGACTAATGGATCAAATGGTACAACACCAAAGACTAATGGATCAAATGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGACGGATCAGACGGTACAACACCAAAGGCTGACGGATCAGACGGTACAACACCAAAGGCTGACGGATCAGACGGTACAGCACCAAAGGTTGACGGATCAGACGGTGCAACACCAAAGGCTGACGGATCAGACGGTGCAACACCAAAGGCTGACGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACGGTGCAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCAAAGGCTGATGGATCAGACAGTGCAACACCAAAGGCTGATGGATCAGATGGTACAACACCAAAGGCTGATGGATCAGACGGTACAACACCACAATATGAATGGAACGCTCAAAGCAAGAAATGGAAATCCAAATTCAAAGAGCTTGTTGAACTTTTAAAAAGCTCATTAGATAAATTCGTCAGTAAACTGGACATCAAAGTCTGCTGCAAAAAAGAAAGAAAAAAAAATGATTTCAAGATTGGCAAAGGGACTAGTGGAACGATCGTGTATCTAGGCTTTTACAAAGCTGATTTCTGCAAAGTTCTGATAGAAGGGGCTGTGAAAAAGGTGCCTACAATGGACCACCCAGAAAGGAAGAAAGAACATGAAATTCTCTTGGGGTTGCAGGACAATAACATTGTGCATTTTATGCGTGCAGAGTGTGCGGATGATGGTGGGATGTACATGGTCTTCAGGCTGTGTGATTTCACCCTCACTGGTTGGGTCAATCACAATAAAAGCAGAAGATGTTGGAGAAGCTCAAGTGATATGATCATACAGCTTCTACAAGCACTGGAGTTTCTTCATCGAAATAACGTTTTGCACTGCGACGTAACTCCTGATAACATATTAGTGATGGAAGATCAAACGCTGAAGTTGGGTGATTTTGGACTCAGTCGAAGATTCGTGGATGGCCGTAGCAACGGGGTTCCAGCAGGCACACCAGGCTGGAAAGCAAAAGAAGTGCTTGACTGCCAGCCAGGAGATGACGTCAGGTACACACCGTTCACTGACATCCAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00531	Death	Death domain	Domain	Interproscan
PF00791	ZU5	ZU5 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000488	Domain	Death domain	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000906	Domain	ZU5 domain	Interproscan
IPR001315	Domain	CARD domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR053330	Family	Mucin-22-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37000	MUCIN-22	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-