| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| LLU|FUN_005427-T1 | DNA-REPAIR PROTEIN XRCC1 | scaffold_130 | 6611 | 24045 | - |
| CDS | |||||
| LLU|FUN_005427-T1 | |||||
| Transcript |
| LLU|FUN_005427-T1 |
| Protein |
| LLU|FUN_005427-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | Family | Interproscan |
| PF01834 | XRCC1_N | XRCC1 N terminal domain | Domain | Interproscan |
| PF16589 | BRCT_2 | BRCT domain, a BRCA1 C-terminus domain | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001357 | Domain | BRCT domain | Interproscan |
| IPR002706 | Domain | DNA-repair protein Xrcc1, N-terminal | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR036420 | Homologous_superfamily | BRCT domain superfamily | Interproscan |
| IPR045080 | Domain | XRCC1, first (central) BRCT domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11370 | DNA-REPAIR PROTEIN XRCC1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000012 | Biological Process | single strand break repair | Interproscan |
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006284 | Biological Process | base-excision repair | Interproscan |
| GO:0006303 | Biological Process | double-strand break repair via nonhomologous end joining | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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