Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
LLU|FUN_001130-T1 | ATP-DEPENDENT RNA HELICASE | scaffold_1043 | 142842 | 160528 | - |
CDS | |||||
LLU|FUN_001130-T1 | |||||
Transcript |
LLU|FUN_001130-T1 |
Protein |
LLU|FUN_001130-T1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
PF01424 | R3H | R3H domain | Domain | Interproscan |
PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001374 | Domain | R3H domain | Interproscan |
IPR002110 | Repeat | Ankyrin repeat | Interproscan |
IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR034083 | Domain | DExH-box ATP-dependent RNA helicase, R3H domain | Interproscan |
IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
IPR036867 | Homologous_superfamily | R3H domain superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR18934 | ATP-DEPENDENT RNA HELICASE | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0004386 | Molecular Function | helicase activity | Interproscan |
GO:0005515 | Molecular Function | protein binding | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0005622 | Cellular Component | intracellular anatomical structure | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |