Gene detail

Detailed information of LLU|FUN_001056-T1 in Lamellibrachia luymesi Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
LLU\|FUN_001056-T1	DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE	scaffold_104	315583	353286	-

Gene Structure

More details in Jbrowse Sequence

CDS

LLU|FUN_001056-T1

ATGTGGCTGCAAGTCAGAGTAGTCCCAGTTGTGGATGCAAGTTATGGTAGCTCAAGTTGTGGCTGCAAATCAGGGTCGCTCCAGATGTGGTTGCAAGTCAGGGTCCCTCCAGATATTGCTCAGGAGGTAGCTTATGGCTCGGTGATCTCCCTGAAGAACTACAGAACTGGAGGTGCCTATCTGCATTCTCACTGGCATCTCTACCCCGAGGGTGTTGGGGCCCGACAACAGCAGGTGACAACATATGGACATAAGGATGAGAATAACATGTGGCTGTTGAAGCCGGCTGATCGGGACGCCTCTGCCAATGACACAAACATAACCATTGTGATGAATGGTGATCTCATTCGGTTGCAACATGTCGAGACGAGCAGGAATCTCCACAGCCACAGAGTGAGAGCCCCGCTCACCCAGCGACACTACCAACTCACCTGCTACGGGGAGAATGGAACCGGGGACACAAACGATGTCTTCCGAATAGAGATCCTAGGCGTACATGACCGTCAGTCTCTCAAGACTGTGCGCTCTGTCTTCCGGCTGATTCACCTCACAACGAGCTGCGCAGTTCACTCACACAACAAGCGTCTGCCAAAATGGGGTTGGGAACAGTTAGAGGCCACATGCAATCCAAACACCAAACACAAACACACCTTGTGGAATATCGAACAAGTTTTGGACACCCGATTGCCAAACATAAGTTTCAGTGTCTATGCCCCAAGTTTCCTAGAAAAGTTCCTAGAATCTCATGCAGTCATGCTTCAGGGAAACAGCGGCTTGAAGCCTCAGGAAGGGGAGGTAACATCACAGCCATGGCAGTGGCCCATCAACTTCAGAGATGAAGCTCACTGTGCACATCCATTGGCAACTTCACGCAGTGAATCCGCCTGGTGGCAGGTGGACCTGGGGGATGTCTACGTCATCAACAGTGTCATCATTGTCAACGGCTATCAGACAGGAGGCTCCAATTATTTACAAAATATACACATCAACATTGGCAACTCATCCAATGTTATGGATCACAGTTTGTGTGGTGAACAAGTAAATACAGTTCATGCAAAGACAAACATAACCATACCATGTGAGGGATGGGGGCGACATGTCAGCATAAGGAAGTACGGACGACACAGGAAAGATGCTTTGTTGTTCTGTGAGGTGTTTGTCATTGGATACAAATACTGGGGTTGCACCAGTGCATGTGAAGGCAGCTGTAGCCCAGTCATCGGCTGTGACAAATGTCTGGTTGGAAAGAAGATGCCAGATTGTAAGCAAGACTGCGATGCAGGTACTTATGGCATCAACTGTGCTGAGTCGTGTGGTCACTGTGCTGCTGGTTCTGACCCTTGTGACCGAGTGACCGGCGCTTGCAGTGGAGGATGTCAACAGTGGTATGGACTCAACACTTGCAAGGCTGAAATCACTAGAGTTGATTATTCATCAACACCGAAGAATGTGTCTGTGTCAAGTTCTTCTGTGTCTGTGAGTTGGCCACAGTCAGAGCGAGTACCTCCTGGACTGGAGAGTTACTACCAATATGTAGTTGAGGCTGCAGATGGACAAAGTACAAAACAAGTGACCAGACATTTCGTGGCTGAGCAGAGTGACCAAACTGCGGACATCAATGACCTGAAACACAACACAAACTACGATATCAAAGTGAGGATTGACGCCGAACGCAACACACATAAACGAGAGGGCAATGCTGGTGGCATACTTAGAGTGAAGACTAAATGTAAAGCACCAGCCATGCCTAAAATAGACAGTGTCACACCCACAGATCCTGCTCATGTTGGCTCTAAGATGGGCAGTCTCCATGTCACCTGGCAGGTTATTGGAGACAGCGGTTGTGACAACTTCAAGAAGTTGCTGGTTCAGTACAAGAAGGACTCTGGACAGTGGCAGGACAAACCAATAACTGGTGTGACAGAGACACAGATAACTATAGACAATATTCAGTCTGGATATTACAGTGTGCGCCTGTCTGTGACAAACAATGAAAACATTGAGAGTGTCAGTGACACAACCATATCCACAGTGGGCAAAGCCCCTGTGACTACAACAAAAGCCACTGTGACTACAACAAAAGCCACTGTGACTACAACAACATCACCAAAAGGGCAACAGAGTGTTGATAGTGGCAGTGACTCCACAGGTGTCATCATAGGTGTGGTCATGGCATTGGTGGTGCTCATCATCATTGTTGTGGTTGTGCTCTTTGTCAGACTTCGAAAGAAAGATGGAATGTGCAAAAGAACCGAAAGCCATGGTAGCCGTCCGCCACTGGTAGGAGATGAAAACCCTCCTAATGACATTGTGGGTGTCCTCAACCAAGCGGGGCCACAGGGGGCTCAGGCTGAGGGGGAGTTGGACCAGGAGGAGGAAGAGGTAGAGAGACTGAACCCCATGCCAGAGGAGGGAATCTACATGAACTTGGTGCATGCCAGCACAATGGTGCAGGTGGACAAACTGGAGGCCTACATCAAAGAGAGGGACACCATTCGAGATGGCTTTGTGCCAGAGTACAACAAACTGCCACGTACTGACATGAACAAGGTGAAGACTGCCAGGCTTCCTGATAATGTGCCCTTGAACAGGTTCAGGAACATCTGGCCATGTGTCGAAAACCCTCCTAATGACATTGTGGGTGTCATCAATGAAGTGGCTCAGGATGAAAGTGAGTTGGACCAGGAGGAGGAAGAGGTAGAGAGAGTGAACCCCGTGCCAGAGGAGGGAATCTACATGAACTTGGTGCATGCCAGCACGATGGTGCAGGTGGACAAACTGGAGGCCTACATCAAAGAGAGGGACACCATTCGAGACGGCTTTGTGCCAGAGTACAACAAACTGCCACGTACTGAAATGAACAAGGTGAAGACTGCCAGGCTTCCTGATAATGTGCCCTTGAACAGGTTCAGGAACATCTGGCCATATGACCACAGTCGAGTGAAGCTTCAGATGGATGACGACCATCCATCAGATTACATCAACGCATCCTACATTACTGGATACAAAGACAAGGCAATTGCATACATTGCATGTCAAGATGACCACAGTCGAGTGAAGCTTCAGATGGATGACGACCATCCATCAGATTACATCAACGCATCCTACATTACTGGATACAAAGACAAGGCAAACACATACATTGCATGTCAAGGTCCAAGGCAAAACACGCTGTCTGATATGTGGCGAATGATTTGGCAGCTGAAGATAACCCGTATTGTCATGGTCACGCAGTTGTCTGAAAGCGGAAGGAGGAAGTGCGATATCTACTGGCCATTGACGGTTGGAACTCAGAAAGTCTACGGCAGGGTGACAGTGGTGACCCTCAGTTGTGACGTGTACGCAGACTACACCATCCGCACCTTCCAGCTCACCTGTGAGGAAGGGTCTCGAAAGGTCACCCATTTCCAGTACACGTCGTGGGTGGACAGAGGGGTGCCCAAGTACACGTATCCACTGTTGGCCTTGCGTCGTCTCATCCGCTCATATGACAAACACAGCTCAGGACCCATGGTTGTGCACTGCAGTGCTGGTGTTGGTAGAACTGGCACATTCATCGCACTGGACAGTCTGTTGGACCAAGCTGAAGCTGAACGTCAAGTCGACGTGTATAGGTTTGTCAGTCACATGAGGACAGAGCGAATGGAAATGGTACAGACCCAGGTCCAGTATGTGTTCCTGTACTACGCTCTGTTGGACGGTCTAAAGACTGGACATCTTGCCTACCCTCTGGCACAGTACCCAGACGTGTACAAGAGACTGTGTGATGATGAGAACAATCTGACAGAACTCCGTGAACAGTTCCAGATGTTAGAGGCCCTCAGACCAGACCCGCCAGGACCGTCCAGTGCTGGTCTGCTGAAGAGCAATAAGAACAAGAACAGAAGCATTGACATCATTCCAGATGACAACAACCGCCCGTACTTAACGTCTCGATGCCCTGGGACCAATGACTACATCAACGCTGTCTATGTTGATAGCTACAGGAGACGTATCAGTTTCCTGCTGACACAGATTCCTCGGTCGAACACAAAGATTGACTTCTGGCGTCTCATTCTTGACCATGAATGCCCTACAATCATCATGCTAGATGAAGGAGATGGAGAGGTATACTGGCCTAATGAAGAGGACCCCAAGGAGACGCATGGCACACTGACAGTTGAACTACTGAATGAGCGCTACACTACTATTCAAAATGTGGTTGAACGGGAACTGAAAGTGTATCTTACTGCAACACCTAATCGCGTCCACAAGGTGAAACAGTACCAGCTGACGTCTGGTTGGCCGTGCAACGACGACGTACCCAACAATTCCACAACATTTCTGAACCTAGTGGAGCTTGCCAATCGTCCTGTGAGTGAAGACGATGGCAGTGGACCAACTATCCTGCAGTGCATGAATGGCGCCAGCCACAGTGGTCTCTTCTGTGCTGCCACTCACTTGCTCGGGTCGCTTTCGATTGACCAGTATGTGGACATCTTTCACTCGGCCCAACATGTCCGAAACATGAGACCACAAGCCATCAGTAGTCTGGAGCAGTACAAGTTTCTGCACAAACTTGTCATTGACTACCAGGGACAACATGCCACATACATGAATGTGTCTCCAAGCAACAGGATAGCATAG

Transcript

LLU|FUN_001056-T1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan
PF02366	PMT	Dolichyl-phosphate-mannose-protein mannosyltransferase	Family	Interproscan
PF02815	MIR	MIR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003342	Domain	Glycosyl transferase family 39/83	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR006585	Domain	Fucolectin tachylectin-4 pentraxin-1	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR016093	Domain	MIR motif	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR027005	Family	Glycosyltransferase 39-like	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036300	Homologous_superfamily	Mir domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10050	DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000030	Molecular Function	mannosyltransferase activity	Interproscan
GO:0004169	Molecular Function	dolichyl-phosphate-mannose-protein mannosyltransferase activity	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005783	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0006493	Biological Process	protein O-linked glycosylation	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0035269	Biological Process	protein O-linked mannosylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-