Gene ID | Annotation | Scaffold | Start | End | Strand |
---|---|---|---|---|---|
LLU|FUN_000442-T1 | NUCLEAR PROTEIN LOCALIZATION 4 | scaffold_101 | 261041 | 278067 | + |
CDS | |||||
LLU|FUN_000442-T1 | |||||
Transcript |
LLU|FUN_000442-T1 |
Protein |
LLU|FUN_000442-T1 |
Gene family | Subfamily |
---|---|
Ubiquitin Family | UBD|ZnF|NZF |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF05020 | zf-NPL4 | NPL4 family, putative zinc binding region | Family | Interproscan |
PF05021 | NPL4 | NPL4 family | Family | Interproscan |
PF11543 | UN_NPL4 | Nuclear pore localisation protein NPL4 | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001876 | Domain | Zinc finger, RanBP2-type | Interproscan |
IPR007716 | Domain | NPL4, zinc-binding putative | Interproscan |
IPR007717 | Domain | Nuclear pore localisation protein NPL4, C-terminal | Interproscan |
IPR016563 | Family | Nuclear protein localization protein 4 | Interproscan |
IPR024682 | Domain | Nuclear pore localisation protein Npl4, ubiquitin-like domain | Interproscan |
IPR029071 | Homologous_superfamily | Ubiquitin-like domain superfamily | Interproscan |
IPR036443 | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
IPR037518 | Domain | MPN domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR12710 | NUCLEAR PROTEIN LOCALIZATION 4 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
GO:0031625 | Molecular Function | ubiquitin protein ligase binding | Interproscan |
GO:0043130 | Molecular Function | ubiquitin binding | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |