Detailed information of KAK2193840.1 in Ridgeia piscesae Gene info
Gene IDAnnotationContigStartEndStrand
KAK2193840.1NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGctg5_pilon14113691429204+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01189Methyltr_RsmB-F16S rRNA methyltransferase RsmB/FFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001678DomainSAM-dependent methyltransferase RsmB-F/NOP2-type domainInterproscan
IPR018314Conserved_siteBacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved siteInterproscan
IPR023267FamilyRNA (C5-cytosine) methyltransferaseInterproscan
IPR023270FamilytRNA (C5-cytosine) methyltransferase, NCL1Interproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR049560DomainSAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic coreInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22808NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAININGInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0001510Biological ProcessRNA methylationInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0008168Molecular Functionmethyltransferase activityInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0016428Molecular FunctiontRNA (cytidine-5-)-methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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