Gene detail

Detailed information of KAK2190228.1 in Ridgeia piscesae Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2190228.1	SERINE/THREONINE-PROTEIN KINASE PLK	ctg85_pilon	38542	68444	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2190228.1

ATGGCGTTTGAATACGCAGTTGATCGCCAGACGGCGCCTTTCCCGCTAAAATTCGAGAGGAAGTGCTACAATACGCGTGCGTTAGTCGGAACTCGAAGCACGCGAAATTTTGCAATGTCTACTGCTATCGGGGGTTGGAAAAGTAAACCTGGAGGAGGCATGTCTCCTGGTCCGGGTGGTGACAGGTCAACGACATATGACATTTTTGTCGGTAATTTGCCAGACCAGTTAGACGATGCAGAACTGCAGAGTTTGTTTGCTAAGTATGGTGAGATCAACTCAACCACAGTGCTCTCCGGGAAGAGGGGAGATGGCAAACGGATTGCATTCGTGCGTTTTGTTAATGAGAGTGATGCCATAGCGGCATGCCAGGACTCCACAGGCCTCATACTTAATGGCAATCCTATCACCGTTCGGCGGGCAAGCAAAAGGCCTGCGGGCTCCCAGTCTGGAGGGGGTGCCACTGGAGGGGGTGATGGGACTGGTCGTAAGACTGACCGCCGACAGCCCACAGGTGGACACGGGTGTGGCCCACTTGACCAGAGTGGCTCCATGGACAAGCCAGAGCAAGGGTTCAACCATAAGCCACGAGGGGGCGCTGGTAGTCTGCCACATGCACCCTCCGTTGCAGTGCCTTTAAAGGAGGACAAGGTGATGGTGACCCACATTGAGAGCCCGACCTGTTTCTGGGCCCAGGTCGTGGGCAATCAGTTGGAGCTGCTCCAAATCGTGGAGAATCTTGGGGCTGTGTGCCCCAGTGCCACTGCTCTGGCAGGGCAGCCTCTCATGGAGAAGGTATACGCCACTAAGTTCTCAGAGGACGAGGACTGGTACAGGTGTAGGCTGATTAAGTACATCTCTGACTCAAAGTCGGAGGTTCAGTACATTGACTACGGGAACGGGGAAGTGGTGCAGAACGGTGCCATTGTTGAACTGCCCCCGTCTGTGGCCAACATCCGCCCACAGGCCTCCAAGTACGTCTTGTACGGACTGAAGCCCTACAGCTACGACTCACAGAGTGTCGGCCACGAACAGGGTGTAAAGACGCTGGGAGAACTCACGAACAGCAAACTGCTGTCTGGGAAGATCTACCACGGCCCCAAAATGGGCCCGATTCCCGTGATCCTGGAAGACGGCGACATTGACATCAACCAGGAAATGCTGAATGCAGGGTTTGGGGAGAAGAGATTCACGGCGCATTCACCCCACGGACCGGGAAAGCCTGGGAGTTACCCTGGGGGAGATAGGCCAAGCAAGTGGATGAACGAGCCGTCCAGGAGAAGTCCACCAGCACAGTCCGGTATGGAGACGTTCTCTCGGATGGGGACATTTAACGAACAGGATGTAACAAGTGCTTCAGCAAAGTTCAGATCCACCCCTCCACCTAACTGGGTTGAACTGAAACAGATGCCACAAGACATGGGCCAGCTACAGAGTGAGCTACAGAAGACGCGGAACCAGTTGTACGACCTCCAGAGCCTCACACGGGACTCTCAGGTCGCCGCCTCAGACCTCATTCAGCTACAGCGCGAGAAGAACTCGTTCATCATGGAACTGGCAACCACCAGGGGAAAATTGCGGACGTTAGAAGACGACTATTCTGAGATGACAGTAAAGCTACAGGAAGCCGGTCTACATTATAAGATGGTCAACTTGCTGGCCGGTGTCAACAAAGTGAAAGAACTCCGGAAACAGTTCCCCACAGACTCACAAACCCCAGACAACATCCAGCGAGCCATTGACCTGGTGAGCAATGTCAGCGACCGCATCTCAATCCCATCTCTCAGCATCATCACGGAGTTAGAGACTGTCATGGCTTGTTATAACACAGCTCAGGATGACATACGAGCATGCACGGATTTGGAGTCACTGCCGGCCCTGATTGTGACCAGAGATGAGCAACGTGTTGAATTATATGACAAGATTGTCCACTTCCTTGAAGGCATCCAGTCACTACCCCTGGAGACGCGGGCCGCACAGCTCAAGGACACAGTGGCCTTCCTGGAGATGACCCATGGCTGCTTCCTGAAAACTGAGATCACCAACCCTCTAGGCCTGGAAGACGCCCTGGAAGCTTATCACGAATGGAAGATGAAGAAGGAGCTGGAGTTTCAGGACGTACGAACAGAGACAAACACACGCCACAACGCTGTCATCAGCGCCCTCAGGACGGTACAACATCAACTCTCCTTAGAAGTGGTCAACTCACCAGAGAGTCCACCAGCTGCTACGGCCAATCTTGACCAGCTGCTGGCCAAACTACAGGCTGCCATGATGAAGGAAATTGAGAAGACTGACATACAACGTGACAGTGAGTGTGGCTTCATCGCGATCGTGCTGAAGACGCTGGTGACGCAGGTGAGGTGTGAGCTGAAGGACATCCAGCAGTTGGAGACCTTGAGGCTGGAGTACCTGGGTCTACAGATGCAGCTGGGACACTGGCTCACAGAGTGCCCCAGTGTGGCGGACCTCAAGGCCGGCAGACAGACCATCAAGGCCCTCAAGTCACGGCTACGACACACACTCGCAGACAAACAGGATGCTGAGGAGAGTGATGACAGTCGATCTGACGAACTTGCCACAATCAACAGTGAACTCACTCAAATACGCAGTCAGCTGCAGGCGGCTTTCGCTCAGGAGAGTGAACTACTGAGTGAGATTGCTGAATTGAATGAACGCCATTTCCCGGAGCTTGCTCTACAATATCCGGAGTTCAACATAGACAATGAAGTGAAGTACGGGGGGCTGTTGAAGTTGAGTCACACCTTGGAACAGTACGATGTGGAGCCACTGCCCGGCTGCAGCAAGAAGTCCATCATGAAGTCCACTCACTGTGGCAAGCCTGTCGTTATCAAGGAGTACATCATAGACGACGGAGGTGGACAGAAGATGGGAGAGTTCATGCGGCGCGCCATGGCCTACAACAGTGTGGTCAACGAACATCTTGTGCCACTTCACGACATCTTCTTTGGCAAGAACGAGCGCCACGCCTACGTTAGACTGCCGTATTACGCCAACTCCCTGACTAGTCTAGTCGAAGAGCGACATCGGCTTACAGACACGGAGATCTACCGGGTGCTGGTGGGGGTGTTGAAGGGATTGAGGGCGCTGCATGAGATGAGACTTATCCACGGGGTCCTGCACCCCAACAACATCTTCCTCGACGACAACAACAATACCTGCATCGCAGACTTCGACTTCACAAAGACACTGAAGCAGCGTGCGGAACGTGTTTTCACGACGTCAACAGGTCTGGTGTTTTCTGCACCAGAGGGCGCCAGCAATAGCAGCCATTGTTCCGACATGTTCAACTTTGGTTTGTTGATGCTTTGGCTCAACTTCCCGGAGGTTCACTTCAACGTGAGCAACAAAGGCATTCCAGACATCTCGTGCGTTGGCATGAGTGAAGAGCTGTCAACCATCATATACAACCTGCGCAGTGAGAATCCTGTGCAGCGATTTACGGCCTTTGACCTTCTCAATGACCCCTACTTCATGACCCCGCCAGAGACGTTACCTCGCCCCATCGCCAACCCCGAGGAGGATGTCATCCAGTTGAGGCCTCGTACTGTCAGTCCGACCGACAGGGACCGTACCGTTCCGGGGGGCATTCTCAAAAACGGTACAGCCGCAGCTTGCACAGAGGGCATTGACCAGTCGGAACAGATAGGCTTGCAGGACGAAGCCGAAACTACACCACTAGATGGCGCCACTTGTGATGACACGCCTGTGGAACCAGTGACGGAAAACTTGACCGATGACATCCAGAACAGCGACTCGGTGAGCGATCAGCCGAGAACAGATGGCCTGCAATTGGACATTCCCGCGATCAGCGTCCAGCCCCCCACGCCGACTCCCCTCAGTCCAGTCCACCAACCTGTCGTCAACACCGACGCTGTCTCTCCCGACAGTCTGCCGGACCTTGACGAGATTCTCGGTGTCCCTGTCAATGGTGATGCGAGTAGTGACATGGACGACACGTCCGGTGACGGAGTGCAGGTGATGTTGAGTTGCCACACGACGTCAACAGATGACACAGTGGAGAGTGGTGACACTGCAGAGGCTTGTCAAGTGGCGCAGAAACTCATACAGACATATGAAGAGTTGCCTATAGATCCGTGA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan
PF00567	TUDOR	Tudor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24345	SERINE/THREONINE-PROTEIN KINASE PLK	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-