Detailed information of KAK2188503.1 in Ridgeia piscesae Gene info
Gene IDAnnotationContigStartEndStrand
KAK2188503.1WD40 REPEAT PROTEINctg130_pilon144439161345-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF04003Utp12Dip2/Utp12 FamilyFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR007148DomainSmall-subunit processome, Utp12Interproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR027145FamilyPeriodic tryptophan protein 2Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19858WD40 REPEAT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000028Biological Processribosomal small subunit assemblyInterproscan
GO:0000462Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0032040Cellular Componentsmall-subunit processomeInterproscan
GO:0034388Cellular ComponentPwp2p-containing subcomplex of 90S preribosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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