Gene detail

Detailed information of KAK2179245.1 in Ridgeia piscesae Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2179245.1	PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4	ctg503_pilon	149643	191080	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2179245.1

ATGGGTAACCAACTGACAGGCATCGCACCGTCTCAGATCCTACCCATAGATCATTATTTCACTGATGTGCCCGACTACGAATTTGATATCAGCTTGGGCAGCACCCGCTTCTTCAAAGTGGCCAGGGCCAAGTGCAAGGAAGGATTGTCAGTGGTCAAGGTGTTTGTGATTCATGACCCTTCACTGCCCCTCCAGACATATCAGGATCAACTGAAAGAAATTAAAGAAAGATTGCATGGCGCCTCCAACTGTCTGCCATTCCAACGAGCTACGATATCAGACAAAGCAGCCCTGCTGTTTCGCCAGTACGTCAAGGACAGTCTGTACGATCGCATCAGCACTCGGCCATTCCTCAACAGTATTGAGAAGAAGTGGCTCGCCTTCCAACTCCTTTGTGCCATCAACCAGTGCCACAAACTACAGGTGTGTCACGGAGACATCAAGTCTGAGAATGTGATGATCACCAGCTGGAACTGGCTTCTTCTGACAGACTTCGCCAGTTTCAAGCCGTCGTATCTGCCACAGGACAACCCGGCAGACTTCTCATACTTCTTCGACACGTCCCGTCGGCGGACATGTTGTCTCGCACCGGAGCGCTTCGTTGAGAGTCTGTGGAAGAACGCTGACCCAAGCAGCCAAAATCTGCCCCTTGACCTCAGTCTGGACGACACTGACCGGGGGGAGTTGACACCTGCAATGGACATCTTCTCTGTCGGGTGTGTGATAGCGGAGTTGTTCACAGAGGGAACGCCGCCCTTTGACCTGTCAAAGTTACTCGCCTACCGCAGTGGTGACTACAGCCCTTGGAAGTTGCTCAACAAGATAGAAGACGTCCACATTCGAGAGTTGATTCAACACATGCTGCAGAAGGAACCAAAACTGCGACTGTCGGCCGAGGAATACCTGACCTCACAGAGAGGGAAGGCCTTTCCTCAGTACTTCTACACCTTCCTGAAGATGTACATAGAGAACTTCTCCATCAACCCCAATATACCAGCAGATGAACCCATAACTAGGATTCACCGGGACATGGAGTCGATAGTGAGCAGCCTGAGTCTGAATGACGTCAACTGTGAAAACAACACGTCCCTGGTCATCCTTCTCTCTGTCGTCACGTCCAATCTGCGCAACATACAGTACTGTAGTTCCAAGCTGTTGGCTCTTGAGGTCCTGTTGACGTTCTCACGCTATGTCACAGCAGACGTCATCCTTGACCGCATCATTCCCTACACGTTGTGCCTGCTGGACGACAAGTTTCCCCGAGTGCGAGCTGAGGCCATCCACACTGTGACACAGTGTCTCAAGAGTGTTCGCAGTCTGCCGGTCAGCGACACTCATATCTTCCCGGAGTACATTCTGCCCCACATGCACCATTTGAGTGATGACTTGGGAGTAATGGTTCGAGTCGCATATGCAGAGAATATTGCCTCCCTGGCAGAGACTGCTCATGGGTTTCTGGAGATGGTTCAGTTGGACATCATAGGCAAACATGGAGGGGACAAATCACAGGAAGTCTCTCAGTCTCAGGCCCTGTACGATGACGAGCTACAAGCCCTGCATGAGATGATTCAACAGAAGGTCGTCACCCTCCTCAGTGACCCCGAGAACATCGTGAAGAGGACCTTGTTGGAGAACGGCATCACACGGCTCTGTGTCTTCTTTGGACGCCAGAAGGCTAATGACGTCTTATTGTCACATATGATAACCTTCCTCAATGACAAGTTTGACTGGCAGCTGAGGGCAGATTTCTTTGAGAGTCTTGTCGGTCTGGCCACGTACATAGGCTGGGAGAGTTCGTCCATCCTCAAGCCACTTCTACTGCAGGGTTTGAGTGACACGGAGGAGTTTGTGATCCACAAGACACTGAGTGCGTTGACGTCTCTCATGGAGCTGGGTCTGCTACAGAAACAGTTCTTCCACGAGCTGCTCATTGAAACCGTGCCTTTCTTCTGTCACCCGAACATCTGGATCCGCGAGGGAGCAGTGGGCTTTGTGTCGGCCACGGCGCGGACACTCAACATCGCTGACGTCCACTGCAACGTCCTGCCCCTGCTACAGCCCTTCCTGCGTCACTCCATCACACTCCTCCACAACGAGGTGAACGTGTTGAATGCACTGAAGGCACCACTACCGCGAGTCATCTATGACTACGTCCTCAAGTCATCACTTGTTGAGAAACTCTTTGACAGTCTCCAAGACCGTCAACTCATACGCAACATCTGTCGGGCCGGCCATAAACCAAACTATCCAGAAGTTGAGTACGGCCTAGCACAGTTGTTTCGCAAACTCGCATCACAAGGAATGACGGTGAATGAGGAAGACTTGATGCTGGCCATGAAGGACTTCATGTTGAAGCTACACAGAGCTCGCAGTGCCAGCAGCACTGAGCCAACAGGCAGCCAGTCGTCGCTGAAGGATGACCAGATGACTCGGCCAGGCGTGACCAACCTGAAAAGCATCAGAAAGCCTGTGATTCGTCGACATGCGGACCTAGTGCGATGGGGGGACCGCCGACTGGAGGGCGAGATGTCTGCTATCAAGAAGCTACCAGCAAAGAAACCAGGCGAAGGAGATTCTCCGACTACTCTGATGAACGAAGACTGGAAGCAGATGTTCGGCTCGATGAGCACCGGTGCTGCCACCACTGGTGAGAAGCCACACCGCTCCCTCGTAGACAGCACCACAAAGCCAAAGCAACCGTCGGTTCCACAAGTGTCAAAATCTTCGGACGAACAGTCGACTCATGAGAGAAGTAGGTCAAGGTCAAACACTCCACAGCGAGTGATGTGTGAGATGTCAACTGGTGAAGTCGGCAGTGAGAGTGGGGCGGAGAAGAAGACCCATGAGAAAGTGCAAGTGCGGTGTGCGGCGTGCAAGGTCGACCTGCAGCAGTTGGTGCACAAGAAGAGGGTGCAGTTTGCCAACAACCAGCTCACCAAGGACCTACTCTCTGCGACCGTGTGGGAGACCAAGGCACCATCCCCAGCCAACTGGAGGCCCAAGGGACAGCTCGTGGCTCATCTACACGAGCACCGCGGGGCAGTGAACAGAATCCGAGTGAGTGAAGACAACAGTTACTTTGTGACGTGCTCCAACGACGGCTCTGTGAAAGTGTGGGACTGTAGCCGCATGGAGGGCCGAAGTGTCACCAACCGGTCACGCCTCACTTACAACAAGCAGGGCGGGCAGATGAAGACTATCAGCTGCTGCGAGTCGTCACAGTCCATCGCTTCAGCCTCTGACAGGGGCACCATTCATGTATTCAGGATGGAGGCCCATGGTCACGGCGTCACTGTGCTACATTCCCGCAATCTCAATTTGGAGCGGGATGGCCAGATAGTGGACATGACCTACTACGACACAGGTTCTCAAAACGTGTTGGTCTACGCCACGGTCCATGGGGCCATCATAGGGTGGGATTTACGCGCCCCTAGAGACATCTGGAAGTTGAATGATGACCCAAAACATGGTCTCATCACATCCTTTGACGTCCATCCAATGTTGAGTTGGGTGGTGCTGGGCACTAGCAATGGCACTCTTGTCTGCTGGGACATGCGCTTCCAACTACCTGTCACCACCGTAGTTCACCCCACAGGTGCACGTGTCAAGCGTGTGTTGACACATGGCAGTGAGCAGTCGTGTGTAGTGTCCGCTGTCCAGGGCAACAATGAAGTGTCGATGTGGGACATGGAGACAGGCGCACGCCGCAGGACACTCTGGGCCAGCACTGCACCCCCACTGTCTCTGAATAAGGCGTCCCACCACAGTGTGAATGGTCAGTTCATGGGTCCCCCTGACAACCCGTTCCTGCTGACCGCCGGCTCGGACATGAGGATACGGTACTGGGACCTCAGCTGTCCCAACAAGTCTCATCTCATCGTGCCAGCTGCTGGTGACCCGGTCAACCAGACGGTCATCTCCTACCGGTCGCAGTTGATCGAGGGCACAGAAGTATTGCAGGAGACGTACAGCCCCCCTCGCTCCGTCGGCACCGAAGACATCCCCCGTCGTGTGCCCGATATGCCACCGGTCGGCCATCATGACATCATCACTGACCTGAATGTGTGTCAAAGGTCACAGTGCTTCTTTATTACGTCTTCACGTAATGGCGTCGTCAAAGTGTGGAAGTGA

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR045162	Family	Serine/threonine-protein kinase Vps15-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR17583	PHOSPHOINOSITIDE 3-KINASE REGULATORY SUBUNIT 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0006623	Biological Process	protein targeting to vacuole	Interproscan
GO:0016236	Biological Process	macroautophagy	Interproscan
GO:0030242	Biological Process	autophagy of peroxisome	Interproscan
GO:0034271	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type I	Interproscan
GO:0034272	Cellular Component	phosphatidylinositol 3-kinase complex, class III, type II	Interproscan
GO:0045324	Biological Process	late endosome to vacuole transport	Interproscan
GO:0071561	Cellular Component	nucleus-vacuole junction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-