Gene detail

Detailed information of KAK2156732.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2156732.1	PELOTA	ctg206_pilon	80005	119000	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2156732.1

ATGGCGACCCAGAAGCCAGGTGGTTGGGTCCAGTCTCTTATTACCAGATTCGATTCACAGCTACCTGTGAGAACTGGTCTACATACAACACAATCCATTCAGAATGTAGAACAGAACAAGGAGTGCTTGATCAATGTCAGCAAACACAAGTTCTCTTTGGTCATCAATGGTTTAACCAAAACTCTGCAATCTGTTGATGCTATGCGCATATATGGTGCTGAGGCGGAAAGGAATTTCTATGAATCTCAAGTCATTATTCTTGATACATTGGAACAAGTTCTGAACAGTCAACCCAAAGACACATCTCGTTTAGATGAAGCTATATATGTGAAGCTATTGCTGCCAGAAATATGTAAGCTGAAGCATCTTGCATCAAAAGTGCTCTTTGCACTGAGCCAGAACAATTTTACAGCAGTATTTAGTCGTATCTCAGCTCGGCTTACTGCGCTGTCATCATCTAATGAAGATGTTACAGATTTTACAGATCTGGAACTCATACAGCATATTAATGTTGATTGCAATCGACTCACCAAACTATTAAATGAATGTGTTCAGAAGTTCAAATCTCAAAGAAGGCAGGTGTATCATGTGTTGGCTACAAGCTTAGAAAAGGCAATATGGAATTGGATGGACAATTATCCAGATGAGTTCACAGAATTACAAAAAAAGCCAAATGATGAACTTGCAGATTGCTGTGATAAGTTATTTGAGCTGTTTAACACGTTTGCTATTGAAAGCAACAAACGTAAAGCAGCTGTTTGGCCACTGCAAATGATGCTTTTGGTTCTGTGTCCGAAAATTCTGGAAGAGATTAGAAATGCTGAGACTGGAGCTCCATGTTCAGCACAGCATATGAAAAAGAAAAACTTCATTGATGAATTGAAACGTGTTCTAGTAAGTCATACATCTAAACAGCTGATTGAAGGCGCAGCTGTTACTTGTGTCAAGCTGTGCAAAGCATCAACTTACATCAACATTAAGGACCGAACTAATGTGCTCTTTTTGCTGGTACAGTCTGTTGTGCAGGAACTAAAGACTCTACTGTTCAATCCATCCAAACCATTCTCACGTCCAAATAATGTCAGTCAGGATGTGGATCTGATGATTGATTGTTTTCTGTCATGTTTCCGGATCACTCCACACAATAATGATCTGTTGAAGGTCTGCTTAAATCAGCATTCACCTCCAACATTTCACTTTGTGCTGGTTAATGTACTACACCGGATCATAACACAGCCACGATTATTATGGTGGCCAAACATAGAGATCATGTACAGCAAATCTTCAGAGCTACGAAGTCTCTTCACAGACACACTGAACAAAGTAACTCAGATGAGTCATGCCCCACTACGGTTATCGCAGGCATTACTTTGCTTGCACCAAGTAGAAATTATTGAGCTTTGGAATCCTGAGGCTCCTATCAACACTTTCTGGGATGTAAGCTCCCAGGTGTTGTTTTCTATATCCCAGAAACTGATTCAACATCAGATTATGAACTACACTGAAATCCTGAAATGGTTGCGAGATATTCTTGTTTGTCGGAACCACTTCCTACAAAAGCATAAGGACTATGTTAATGTTGGCAGCAACATTCCTATATGTAGACAAGCTCATATTAAGCTAGAGGTGGTGTTCTTCATGTACCTTTGGAGCATAGATATAGAAGCTGTTCTGACAGCTATGTCCTGCTTCCATCTGCTGTGTGAAGAAGCTGATATCAGATGTGGCGTAGATGAGTTGGCAGTCACCCAGCTGTTACCTAACTATAATGTGTATGCTGAATTAGCAGCAGCTAGTACTGTACTTACAACAGGACGTGCTGTGTTACAAAAAAGAATTATGGCATTACTAAGAAGAATAGATTCATCAACACCAGGAAACACCCAGGCCTGGGAGGATACATTCATGAATTGGGAGAACAGTACAAGATACTTGGTGAATTTCCCAAAAACAAAGTTTGAAGAAGGTATGATTGACCCATGGCACAGAAGTGCAAAACGTAGGACACCAAACCAAAGCACAGAACATGAACTAGAGGACCATTTGAATGAGTGGGCCAATATGACTGGCTTTCTCTGTGCACTTGGTAGTGTTTGCCTGCAGAATAAGTCTCACAGAGCCAGCGTATCAACTATGACTAGTCTGGACAGCAGGAAGAGTAGTGTTTTACCAGGATGTGGTGATCCACAGTATTGTCCTGTTACACAATTTATAGGTCATCTATTAAAGTTGCTTGTGTGTAACAATGAGAAGTTTGGACCTCAGATACAGAAACATGTTAAGGAACTGGTTGGGCATGAGCTGAACCCATCTATTTACCCAATACTCTTTGACCAGATCAAGATCTTTGTTGACAAGTTCTTTGATTCATCAGGCCAGGTGATAGTGAATGAACAGAACACTATGTTTATAGAGAATATAATATTTATTATGAAGAACATTCTTGAGAACAAAACAGAAGCTCCATGTGACCACCTGAGTATTACAAGTATTGAGGCACTAATGCTCACAGTTGTAAGATATGTTAGACACTTAGATTCTACAATACATGCCATACAGATAAAGACCAAAGTGTGTCAACTGGTGGAAGCTATGATGAATCGTCGTGATGACCTGACATTTAGACAAGAAATGAAATTCCGTAATAAGTTGGTAGAGTACCTGACAGACTGGATAATGGGTAACTCACATCAGCTTAATGTCCAGGGTGATGTATGCCTAGTCTCAAGATATTTCACACTGTTTATGAACCTGCTGAATGACTGTTCTGAGGAAGCTACTGAGGAGAAATGTGCTGCTGATGGAACAAGGAAAAGGACTAGTTCAAATCTCAGTGCTCTTAGAAACTGCACAGTATTAGCTATGTCTAATCTCCTCAATGCTAACATTGACAGTGGTCTCATGCACTCTATAGGATTGGGATACCATCGTGATCCACAGACAAGAGCTGCTTTTATGGAGGTCCTGACCAAGATCCTCCAGCAGGGCACCGAATTTGAAACATTAGCTGAAACTGCGCTGGCAGACAGATTTGAGCGACTAGTTGAGTTAGTGACCATGATTGGTGATAAAGGGGAGTTGCCCATAGCCATGGCCTTGGCTAGTGTTGTCGCTACACCCCATATGGATGAGCTGGCTCGTGTATTTGTTAATCTGTTTGATGCCAAACATCTGCTATATCAACTCCTGTGGAACATGTTCTCTAAAGAGTATATTGTTATCTTTCTTGACACATTATACAACAGACTTGAACCAGATGATAGTATTGAAGATAATCGTAAGAATCTTATGATACTCACGCAGAAAGTATTTAATGCCATAGTGGCATCAGCTGAAAGGTTTATCAATCCTGCTCTGGTGGCCCCTTGTGAGTCAGGTATAATTGATCAGCAGCCAACTCAGAGGATGAAGCGAGGTTTGACACTTATGTGTAAGATAATGCAGAACATTGCTAACCATGTCTTGTTTACAAAAGAACAACACATGCGACCCTTTAATGACTTCCTGAAAACCAATTTTGAATCGGGAAGAAGGTTTTTCATTGAGATTGCTAAGGACTGTGAAACACTTGATGCTAGCAATCACAGTTTGTCTTTCATCAGTGATGCCAATGTTTTGGCACTACACAGACTGCTGTGGATCAACCAGGAAAAGATAGGTGACTACTTGTCCAGCAGCAGAGATCATAAAGCAGTTGGTCGCAGGCCATTTGACAAAATGGCTACTCTTTTGGCTTACCTAGGACCACCAGAACATAGACCTCTTGATTCACAGTGGAGTAGCATGGACATGACAAGCACAAAATTTGAAGAAATAATGTCCAAGTACAACATGCATGAAAAAGATGAATTTAAGAGCCTGAAATCACTGAACATTTTCTACCAAGCTGGCACCAGCAAAGCTAGTAATCCCATCTTCTACTACATAGCTAGAAGATACAAGGTTGGTGAAATAAATGGTGACTTACTGATTTACCATGTCCTGCTCACCCTCAAGCCATTCTACCATAAACCATTCGAACTTATTATAGACTTCACACATACCTGTGCTGATAACAGGTTTCGGAACAATCGTAAGCTGATATTCATTGACCACCCAACAAAACTGAATGAATATGTGGATCCTGATCAGCAGAAGCTTCCAGGAGCTACCTTGTCACTAGAGGAAGATCTCAAAGTCTTCAACAATGCTTTGAAGCTATCCCACAAAGACACCAAAGTTGCTATCAAAGTTGGCCCTAATGCTATACAAGTTACATCATCTGAAAAGAGTAAAGTACTTGGCCATGCTGTACTCCTGAATGATGTCTATTATGCTTCAGAAATAGAAGAGGTGTGTCTGGTAGATGACAATCAGTTTACTCTGACTATCTCTAATGAGAGTGGACCCCTAAGCTTCATCCACAATGATTGTGACAGTATTGTACAAGCCATTATTCATATTCGAACTAGATGGGAACTCTCGCAACCAGATTCAGTAACTGTTCATACAAAGATACGACCGAAAGATGTACCAGGAACACTGCTTAATGTGGCACTGTTGAACCTGGGCAGTTCTGATCCAAGTTTGAGATCAGCTGCATATAATCTCCTTTGTGCTCTCACACAAACATTTGATCTGAAGATAGAAGGACAGTTGCTAGAAACTGCTGCTAATGAACCTCATCTTAGCCTGGAGTTTCTCGAGGAATGTATCCAAGGATTCAGAAACTCAAACATAGAGATGAAACATTTGTGTCTTGAATACATGACACCATGGCTACCTAATCTTACCAGATTCTGTAAACACACTGATGAAAACAAGAGACAGAAAGTGGCCTTAATTCTAGACAAACTTATCACAATGACAATTGATGAAGTTGAACGAAGTGTGACAGGTGGCTTAGGCTCCATACAGGCTGAGATAATGGCTGATACAGCTGTAGCACTAGCTTCAGCTAATGTGCAGCTGGTCTCCCGGAAAGTAATAGGAAGGCTTTGCAGGCTGATTGACAGAACTTGTATGTCACCAACACCTACATTGGAGCAACATCTTATGTGGGATGATATTGCCATATTGCTGCGATATCTCCTCATGTTGTCATTTAACAACTCACTTGATGTGGCCAGTCACCTTCCTTTTTTATTTCACATTGTAACACTTTTGGTGTCAACTGGTCCTCTGTCACTCCGAGCCTCAACACACGGTCTTGTGATCAACATAATACATAGTTTGTGTACATGTTCCCAGCTTAGCTTTGGTGAGGATGTGATGCGCATGCTAAAACTCTCATTGACTGAATTCTCCTTGCCGAAGTTCTACCAGTTATTTGGCATTAGCAAAGTGAAGTCAGCAGCTGTTAGTGCATTCCGCTCTAGTTATAGACCAGGTGACCGGTCATTTGCCTATACACCACCCGAACAAGAGAGAATGTCATTACAATCATTAGAGATTGTAACTGATGCTCTGCTAGAGATTATGGAGAGCTGCATGAAAGAGATGAAGGAATGTGGTTGGTTGCAGCAGTGGACAGACTTAGCCAAGAGATTTGCTTTCCAGTACAACCCGGCCTTACAGCCTAGAGCAATAATAGTCTATGGCTGTATTAGTAAACAGGTGACAGACTCCGAGATTAAACAACTGCTTCGGATACTTGTTAAGGCTTTAGAGTCATATACAGACCTCACACTGATAGAGGCCATCATCATGTGTCTAACACGCCAGCAGCCATTACTTAGATCTGATTCTCCAATTCATCGACACCTTTTCTGGGTGTCCATTTCGGTACTGCAGCTAGATGAAGTGTCACTCTATGCCTCAGGACTGGCCTTACTTGAGCAGAACCTGCATACACTTGACAATATGGGACTGTTTGAAACAGAACAGGGTTTGGAAAAAATGATGATGGAAACAAGGGAACCACTGGAATGGCACTTCAAGCAATTAGATCATTCAATGGGGCTCAGTTTCAAAACCAAATTTGACTTTGCCATGGTTGGACATTTGCTCAAAGGATTCCGTCATCCAGTGACCAACACTGTGTCTCGTACTATTCGTGTACTTAACATGCTACTTGTGATTGTTTCAAAATCAGCTAAAAGGGACAAGTTTGAAGTGACTCCACAGAGTGTGCCATATCTTGCTGCATTGGTGTCAGTGTCAGAGGAGGTGAGAAGCCGCTGTCACTTGAAACATCGGTTCAGCTGTAGCATCCCCGAAAGCGCATCCAGTGATAGCATAAGTGCTGAGCTGGCATCACACACTAATAACACAGTTCCATCCAACTCACAACCAGCATCCCTACCTCCACAGCCACAGAATCCACCACAGCCGATGCATCATCCCACACCTCCACTGCCACCTCCACCTCCTGAACCAAAGCCACAGCTTCCCTCACCTCCACCATGTCGACAGCCTCCGCCATCCTCGGCCTTTTCTCCTGCCTCCCAGACAGCAACACAGCAACAGATGCTGATCCAGCAGCCTCAGTCTACAGCAGCCCCATCACAGCCACCCCCATCCACATCACCACAGTTACCACAGTCTCTGCAACACCTCGTCCTGCAGCAACAATCTCCACAGCAGCTTCAGATGCTACAAAGTAGCGCCATCTCACCATCTCAACCTAATGGTGGTATAATCCCCGGGCCACCATACTCGGCTCCAGCACAGAGCTGTAGTGGACAAGGATCTGGGGGTGGCCTGTTTAATCCCATTGGTACCCCAACCACACGCAGACAGAAGAGCTGGGATGCTCTGGATCAGACTGCTATGGCACAGGCAAGACACCAGAAGAACTTGCACCTAACACAAGTACCATATGATGTCTTTCAACCACAGTTTAACTGCCCCAAGTCTTGGCGTAGCCTAGACTTGGAACCTAATGCTCGTCCGCCATTCAAGACTCAGCGAAGCAGCTCAATGCCCACTCCAAGGACACAAAAATCAATGGATGTTGGCCCACCAAAAGGTCTTAGTCCAGTAGACAATCACTCACCATGTAATGAAAGAAGTACTCGAGGCTCGGTGTCAAATGAGAATAACATCTTGTTAGATCCTGATGTGCTAACAGACTACCCAACTCAGGCTCTTTTACTCACTGTGTTGGCAACTCTAGTCAGAAACACAACAGATGAGAATGAAGCTAGAATTCTGTATGAATATTTAGCCGAGGCCTCTGTTGTATTTCCCAAAGTGTTTCCAGTCATGTGA

Transcript

Protein

KAK2156732.1

MATQKPGGWVQSLITRFDSQLPVRTGLHTTQSIQNVEQNKECLINVSKHKFSLVINGLTKTLQSVDAMRIYGAEAERNFYESQVIILDTLEQVLNSQPKDTSRLDEAIYVKLLLPEICKLKHLASKVLFALSQNNFTAVFSRISARLTALSSSNEDVTDFTDLELIQHINVDCNRLTKLLNECVQKFKSQRRQVYHVLATSLEKAIWNWMDNYPDEFTELQKKPNDELADCCDKLFELFNTFAIESNKRKAAVWPLQMMLLVLCPKILEEIRNAETGAPCSAQHMKKKNFIDELKRVLVSHTSKQLIEGAAVTCVKLCKASTYINIKDRTNVLFLLVQSVVQELKTLLFNPSKPFSRPNNVSQDVDLMIDCFLSCFRITPHNNDLLKVCLNQHSPPTFHFVLVNVLHRIITQPRLLWWPNIEIMYSKSSELRSLFTDTLNKVTQMSHAPLRLSQALLCLHQVEIIELWNPEAPINTFWDVSSQVLFSISQKLIQHQIMNYTEILKWLRDILVCRNHFLQKHKDYVNVGSNIPICRQAHIKLEVVFFMYLWSIDIEAVLTAMSCFHLLCEEADIRCGVDELAVTQLLPNYNVYAELAAASTVLTTGRAVLQKRIMALLRRIDSSTPGNTQAWEDTFMNWENSTRYLVNFPKTKFEEGMIDPWHRSAKRRTPNQSTEHELEDHLNEWANMTGFLCALGSVCLQNKSHRASVSTMTSLDSRKSSVLPGCGDPQYCPVTQFIGHLLKLLVCNNEKFGPQIQKHVKELVGHELNPSIYPILFDQIKIFVDKFFDSSGQVIVNEQNTMFIENIIFIMKNILENKTEAPCDHLSITSIEALMLTVVRYVRHLDSTIHAIQIKTKVCQLVEAMMNRRDDLTFRQEMKFRNKLVEYLTDWIMGNSHQLNVQGDVCLVSRYFTLFMNLLNDCSEEATEEKCAADGTRKRTSSNLSALRNCTVLAMSNLLNANIDSGLMHSIGLGYHRDPQTRAAFMEVLTKILQQGTEFETLAETALADRFERLVELVTMIGDKGELPIAMALASVVATPHMDELARVFVNLFDAKHLLYQLLWNMFSKEYIVIFLDTLYNRLEPDDSIEDNRKNLMILTQKVFNAIVASAERFINPALVAPCESGIIDQQPTQRMKRGLTLMCKIMQNIANHVLFTKEQHMRPFNDFLKTNFESGRRFFIEIAKDCETLDASNHSLSFISDANVLALHRLLWINQEKIGDYLSSSRDHKAVGRRPFDKMATLLAYLGPPEHRPLDSQWSSMDMTSTKFEEIMSKYNMHEKDEFKSLKSLNIFYQAGTSKASNPIFYYIARRYKVGEINGDLLIYHVLLTLKPFYHKPFELIIDFTHTCADNRFRNNRKLIFIDHPTKLNEYVDPDQQKLPGATLSLEEDLKVFNNALKLSHKDTKVAIKVGPNAIQVTSSEKSKVLGHAVLLNDVYYASEIEEVCLVDDNQFTLTISNESGPLSFIHNDCDSIVQAIIHIRTRWELSQPDSVTVHTKIRPKDVPGTLLNVALLNLGSSDPSLRSAAYNLLCALTQTFDLKIEGQLLETAANEPHLSLEFLEECIQGFRNSNIEMKHLCLEYMTPWLPNLTRFCKHTDENKRQKVALILDKLITMTIDEVERSVTGGLGSIQAEIMADTAVALASANVQLVSRKVIGRLCRLIDRTCMSPTPTLEQHLMWDDIAILLRYLLMLSFNNSLDVASHLPFLFHIVTLLVSTGPLSLRASTHGLVINIIHSLCTCSQLSFGEDVMRMLKLSLTEFSLPKFYQLFGISKVKSAAVSAFRSSYRPGDRSFAYTPPEQERMSLQSLEIVTDALLEIMESCMKEMKECGWLQQWTDLAKRFAFQYNPALQPRAIIVYGCISKQVTDSEIKQLLRILVKALESYTDLTLIEAIIMCLTRQQPLLRSDSPIHRHLFWVSISVLQLDEVSLYASGLALLEQNLHTLDNMGLFETEQGLEKMMMETREPLEWHFKQLDHSMGLSFKTKFDFAMVGHLLKGFRHPVTNTVSRTIRVLNMLLVIVSKSAKRDKFEVTPQSVPYLAALVSVSEEVRSRCHLKHRFSCSIPESASSDSISAELASHTNNTVPSNSQPASLPPQPQNPPQPMHHPTPPLPPPPPEPKPQLPSPPPCRQPPPSSAFSPASQTATQQQMLIQQPQSTAAPSQPPPSTSPQLPQSLQHLVLQQQSPQQLQMLQSSAISPSQPNGGIIPGPPYSAPAQSCSGQGSGGGLFNPIGTPTTRRQKSWDALDQTAMAQARHQKNLHLTQVPYDVFQPQFNCPKSWRSLDLEPNARPPFKTQRSSSMPTPRTQKSMDVGPPKGLSPVDNHSPCNERSTRGSVSNENNILLDPDVLTDYPTQALLLTVLATLVRNTTDENEARILYEYLAEASVVFPKVFPVM

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00616	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan
PF13716	CRAL_TRIO_2	Divergent CRAL/TRIO domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001251	Domain	CRAL-TRIO lipid binding domain	Interproscan
IPR001936	Domain	Ras GTPase-activating domain	Interproscan
IPR004405	Family	Translation release factor pelota	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR036865	Homologous_superfamily	CRAL-TRIO lipid binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10853	PELOTA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0032790	Biological Process	ribosome disassembly	Interproscan
GO:0043087	Biological Process	regulation of GTPase activity	Interproscan
GO:0070481	Biological Process	nuclear-transcribed mRNA catabolic process, non-stop decay	Interproscan
GO:0070651	Biological Process	nonfunctional rRNA decay	Interproscan
GO:0070966	Biological Process	nuclear-transcribed mRNA catabolic process, no-go decay	Interproscan
GO:0071025	Biological Process	RNA surveillance	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-