Gene detail

Detailed information of KAK2155221.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2155221.1	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	ctg246_pilon	563809	593388	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2155221.1

ATGGCTCAGTGGAGGGCACTTCAAACTTTGGTGACCAGTGAGAAGATTAGCGAGAACCAGCTTCAAGTAATTTACTCAAATCGGAGGCACTTCTCTGTTTTGTTCAGAGACAAGTTCGCTACCTGGATTGAGAGCCAGAACTGGGATGAATATTTTAAAGGTGAAGATGTTCAGAAGAATGGAAAGATCATGTTTGATGAGTTGGTGCAGCAGATGGAAGATGACCTTGAAACTCAGACCATGATCAATCGGCTGGCTTTGACCCCAGCTTTAGAAGACTTCAAGCAAAACTACGAAGGCAATTATGAGGAGTTTATCAATTTGATGATCCACCTGCTGCGAACTGAGAATATTCTAATTCAGTCTACACAGGAAACTAGTGGTGAAGAGAGGCATTTCGATGTCGCCCAAGAGAACAGAGAGATAGCTGAGGAGTTGAAGAAATTTGAAACACAGCTGCGGGCATCAAACTTGCAGCTGAGACAGTTGGAAAGTAAACAAAGCAAACTGAAGCCCCATATCAATGATATTCATGCCAAGTTGAGCAAAATTAAAAGGAAGAATGAGCCAGGGTCTGAAGAAGAACTGAAATTTGAGAAAGAACTAAATACCATATCTTGTGAGCTTCTTCAGTTGCGCAAGGATGTGGTTGAGATGATTGGAGAAGTCTGTGACAAAATGCACCAAATACTAACTGCCTCGTGGAATGATCTAAAACAGTGGAAAAAAGACCAACGTCTTGCTTGTACCATGTTATGTAAACCAAAAGAAGGTGTTATGGAAGTCCTTGATGCCCTGTTTGAGCATGTAGCTACAATTTTCCGCCAAGCCTTGAACCAAGTGGATGAGCTTGTCCGAAACTTGACGCTGGTCAGATTTGAGAATGATAGGCACTTGATGCTGGCGGAGCAGTACAGCAACCAGATGGATGAATGGCTGCTGAAACATTTGAACAAAGTGTTTCTTGTCGACAAAAATGTCCCAAAACAAGTGCTGAAGGTTACAAATGGAAAGAGTCTTGGATTCAGTATGTCAGTCAGGCTACTTGGTGGCTATGCCTTGGGTCTTTACGTCAACAAGCCGAAGGTTTCCGTCCGGTTATATCCAGAGAAGCAGTTGAACGATGTCGTGATTGAAAACATGGATCTGCCATCTTCGTGTAACATTCAGAACTCGGAGAACAAACCGGCAGTGTCTCTTCCAATTGTCGTGACGAGTCAGACGTCTCAGGAATGCATGGCTCGAGGAACCATCATATGGAGTGCTGCATTTCGGAGGCCAAAGGACAAGATGCCAGGATGTGACTTTCCTTTCTGGAAATGGTTCATGGCTTGTTTGAATTCGGTCAAAGATACAGTATCCAGAGAATGGAAAGAGGGATTGATCTATGGATTTATCAGTAAGAAGAAGGCAGAGGAAATCTTGAAGAATGAGAAGTGCGGTACATTTCTGATACGATTCAGTGAGAGTATCATAGAGTCTGGACAGAGGGCTGACATCCACGGATATCTCACTGTTGCTTTCAAAGAGATCCACCCAGAGGATGATATTAATATGTGGGTCTGTATAAACTCTACTCCTCTGCAGTATAAGTTTATGACTGTCAATCACAGACACGTTCACGATAAACAATTTGGAGACAAGAAGCTGCTGAAAACTCTGTGGACTCCTGAAGGACATTTTGGTTTCGATGACGTGTTTGCAAAATTTATCAAAGAAGAAGCGGTCATGCCTCAAAGGAGGCGTCCGCGGCAACGAAACTCTCTGGTACCGATGTCACCAATGAATATGTCGATCCAGTCACCGGCAGCCTCGGATTTCAGTGAGGTACTGTCACCACCGCCAGACATGCCCATCTTGTATGATGAATTGCCGACACAAAACCAGCAGCTACAGCAAAAGCAGGAGCATCTGGAACATATTCAACAAGATCTAATGTTTCCAACAAATCCTTCTCCACCAGTGGCCTTTGTACAGCCAATGACATCTGATGATTTAGCTACGCTTGACATGCTGAGTTTTGATAGGATGCTGAACCTGGTGATCACTGAAGACGACGATGTTATGCTGAATATGGATGAGATGAGACCCAACCAGTCTTCCGCAACATAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF01017	STAT_alpha	STAT protein, all-alpha domain	Family	Interproscan
PF02865	STAT_int	STAT protein, protein interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000980	Domain	SH2 domain	Interproscan
IPR001217	Family	Transcription factor STAT	Interproscan
IPR008967	Homologous_superfamily	p53-like transcription factor, DNA-binding domain superfamily	Interproscan
IPR013799	Domain	STAT transcription factor, protein interaction	Interproscan
IPR013800	Domain	STAT transcription factor, all-alpha domain	Interproscan
IPR015988	Homologous_superfamily	STAT transcription factor, coiled coil	Interproscan
IPR036535	Homologous_superfamily	STAT transcription factor, N-terminal domain superfamily	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11801	SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-