Gene detail

Detailed information of KAK2151955.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2151955.1	GLYCOSYL HYDROLASE	ctg344_pilon	44432	52507	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2151955.1

ATGAACATTATTAACTCCGCCTCTGCCTTAAGCCGACGTGGCAGCCTGACCACTCTACATTGGGTTCCCAGCCACACAAATATCGAGGGTAATGAACGAGCCGACGCTCTGGCCAACGAAGCCACTAACCTAACCAACATCCTACACGCAGAACAGACACCAGTTGACGTGGCTATCGGAGATGACGAAATATACGATGGTGATGAATCACTTCCTATCCCAAACAAATGTCTTTTTCTGGGTTATCCAGAGACGAAATACCGTGCAGAGAGTGCAGTTCTACGATCTAATGGCACACCTCTAAAGTGTGGTGGTGAAGGAGATCCCTATTATGTTACATCTGGACTGAAGAGAGAAATCGAAAACAATGGCATCTTACTGCGTGTTGGCAATGGAAAGAATCTATTGGAACAAGCTTATGTCGGTAATGTGGCCTGGGCTCACATCGTTGCTAATAATGTCCTGGCTCGTGATAAAATATTTGGTGGTGAGGTGTTCTTTATCACAGATGATACACCAAAACTGAACCCTTCTAGATTTATGGAGATCTTTCTAAAGGCGAGAGGAATGTCTCTCTCAACAGTCCGAGCTGTTGATGTGATTTTCGGCTATGAGGATCCTACTCAAAACAAATTTAAGAATTGGGATTTTGAAGCGAATTTGTCGAACGATGACTGGACCATTAGTGGTGCTACAGTAACAATTGTACATGATCCTTATCACGGACAGAAATGTATTAAGGTTGAAAATAGAAAAGGCGTAGACTCTGGCCTGTCGCAAACTGTTCAAGGTCTCAAACAAAACACCAACTATTACGTATCTGCCTTTGTCAAGTTATTGACAGATAATCCGGACCACCAAGGATATACAAAGTTTACTCTTTTATGTAAATCAGGTAGAGCTAAGACGATTGTGGCAGTTTTGCCGTTTCAGAGTTCACAGAAACTCTGGAAGCATATTGGCGGCGACTTCAAAGTTTATGCAGGACATGTAGTTAAATGTTGGATACGCGTTGAGCCAAAAGGTATTAGTTACACGATAGATGCTGCCAGCTTCATCGAATTGAGGAAACAATCGAACTGGACGGCATATTTTGATGAGAAGATCCGAAAAATAAGGACTAGCTCTCTTAATATCAAAGGTCAGCTACCAGATGGTTGTTTCCCAGCAAGTACAGTTGTAAAGATTGAACTAAAGCGACATCAGTTTGGTTTTGGTTCAGCCATCAAAGTGAAAGAATTTGTTGGAAATAGAGAGGTTCAAGTGAAATACCGAAATTTCATTCTTAAACACTTCAACTGGGCCGTGTTTGAGAATGCAATGAAATGGAGACAGATGGAGAGGAGATCAGGGAAGATTAAATATAAATTTTTCAATAAGGCAATGGACATTCTTAGACGGAACAACATGACGATTAGAGGTCATGCCTTTTTGTGGGATGTGATGAGTAGAAATCCTGATTGGGTTCAGCATCTTACGGGTTCAGCTCTAAAAGATGCCGCTATTAGACGTATAACATACATGACTAAATATTATAAAGATAAAATCGCTGAGTGGGACGTATGTAACGAGGTCTTGCATCAACACTTCTTTGAAGAGCAATCTGGATATCAAGATCTTTTGGTATCCGAGTTTAAGACTGCCCACAAATATGATGCGAACACCAAACTCTTCCTCAACGACTACGAAATTGTTAGAAATGGAAGACTGACATCGGCGATTGCTGACTTGGCTGAATTTTTAAATAAGAGAAAAGCATATTGTGGTGGCATAGGAATTCAAAGTCATCTTCGTATTGTACCTCTTGATGAAGAAGTTCTGAAGAAACGGGTACAAATCGCCGGAAGACTTAATTTACCAATAACAATAACTGAATTTTCGGTTCATTCAACCGACGTCCAAACAAGAGCTAATGCTTTAGATACGGCATTTAGAGTGTACTTTGCTGATCCTAATGTACACGCCATCTTACTTTGGGGATTTGCTGATCAATTCCCGTCATTCGCTAATGATTTCTACTTAACCGAAGGAAAATATTTCACGCCAAATGCTGCTGGCCAGAAATTGTTAAATCTCATCCACAAAGAATGGTCAACAAAAAAAGATATTCGACCAACAAACAAGATGGTAGACGTAACTATTAGTGAAGCATTCCGCGGAATATACAAGCTGACTGCTGTATGTGATGGACAAATAAAGGTCGAAAAAGAGTTTTATGTGGGAGATGCTCCAACTATTGTCAATTTTTAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00331	Glyco_hydro_10	Glycosyl hydrolase family 10	Domain	Interproscan
PF01073	3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	Family	Interproscan
PF02018	CBM_4_9	Carbohydrate binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001000	Domain	Glycoside hydrolase family 10 domain	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR002225	Domain	3-beta hydroxysteroid dehydrogenase/isomerase	Interproscan
IPR003305	Domain	Carbohydrate-binding, CenC-like	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR017853	Homologous_superfamily	Glycoside hydrolase superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR044846	Family	Glycoside hydrolase family 10	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31490	GLYCOSYL HYDROLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003854	Molecular Function	3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0004553	Molecular Function	hydrolase activity, hydrolyzing O-glycosyl compounds	Interproscan
GO:0005975	Biological Process	carbohydrate metabolic process	Interproscan
GO:0006694	Biological Process	steroid biosynthetic process	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0016798	Molecular Function	hydrolase activity, acting on glycosyl bonds	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-