| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| KAK2149228.1 | ATP-DEPENDENT RNA AND DNA HELICASE | ctg3034_pilon | 2328 | 9854 | - |
| CDS | |||||
| KAK2149228.1 | |||||
| Transcript |
| - |
| Protein |
| KAK2149228.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08148 | DSHCT | DSHCT (NUC185) domain | Domain | Interproscan |
| PF13234 | MTR4_beta-barrel | Mtr4-like, beta-barrel domain | Domain | Interproscan |
| PF21408 | MTR4-like_stalk | Exosome RNA helicase MTR4-like, stalk | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR012961 | Domain | ATP-dependent RNA helicase Ski2/MTR4, C-terminal | Interproscan |
| IPR025696 | Domain | Exosome RNA helicase MTR4-like, beta-barrel domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR048392 | Domain | Exosome RNA helicase MTR4-like, stalk | Interproscan |
| IPR050699 | Family | RNA/DNA Helicase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12131 | ATP-DEPENDENT RNA AND DNA HELICASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0006401 | Biological Process | RNA catabolic process | Interproscan |
| GO:0055087 | Cellular Component | Ski complex | Interproscan |
| GO:0070478 | Biological Process | nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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