Detailed information of KAK2146823.1 in Paralvinella palmiformis Gene info
Gene IDAnnotationContigStartEndStrand
KAK2146823.1TRANSCRIPTIONAL REGULATORY PROTEINctg583_pilon316447317727+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00072Response_regResponse regulator receiver domainDomainInterproscan
PF00158Sigma54_activatSigma-54 interaction domainDomainInterproscan
PF02954HTH_8Bacterial regulatory protein, Fis familyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR002078DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR002197DomainDNA binding HTH domain, Fis-typeInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR025943Binding_siteSigma-54 interaction domain, ATP-binding site 2Interproscan
IPR025944Conserved_siteSigma-54 interaction domain, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR32071TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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