Gene detail

Detailed information of KAK2146784.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2146784.1	THREONINE SYNTHASE FAMILY MEMBER	ctg583_pilon	140837	147919	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2146784.1

ATGATAGTACAAAGTACCAGATCATCGTATAAAACTTCCTTCCGTCAAGCAGTATTTATGGGATTAGCTCCCGATGGAGGTTTGTTTCTTCCTGCTGACAAATTTGATTTACGTACGCTTATTGAATCATTTACCCCCAAAGAGTCGTTTCAGGATATAGCAGAAGCTCTTTGTCGAGTATTACTTGCAGACGATATAGGCGATAACGTTGCACGTGTTGTAGAAAAGTCCTTTTTGTTTTCGCCAACAATAAGGCCTCTAGAAGAGCATATTACATTATTGGAATTGTTTTCGGGTCCCTCTTGTTCATTTAAAGATTTTGGTGCGCATTTTCTTGCTAGTCTGATAGAGTTTTTTCTTATCCAAGAACAGAAACATGTACTCATACTTACTGCAACCAGTGGGGATACAGGCAGTGCAGTGGCACAAGCATTTTACAATAAAGAAGGCATAGATGTAGTTATTTTGTATCCAAAAAACAAAGTAAGTCCACTTCAGGAGTTACAAATGACTACCATCGGTGCTAATGTACACGCACTGGAAGTTGATGGCACATTTGATGACTGCCAACGGATGGTAAAAGCCATGTTTCTGGATACCAGTATTCCATTACACTTGTCATCAGCCAATAGCATCAATATTGGTCGATTATTACCACAATCTTTTTATTATATATTTGCATACTCACGTTTACGCAAACCTGCCTCTTTTTGTGTACCCAGTGGAAATTTTGGTAATCTCTGTGCAGCTACGTTAGCGTGGAATTGGGGTATGGATATTGATATGCTCTACGCTGCAACAAACGCTAATGATGAAGTCCCTGAATATCTGCGTACAGGCGTTTTTCAAGCACGCCCATCGGTGCAAACATATGCTAGTGCGATGGATGTGGGAAATCCAAGGGGAAAAAGGGGGGCAGAAGAAAGAATAATAACTGGCATGAGAAAAGAGACAGTAGACATTGGAAATAAAGGAGCCAAAGCAAGCAAGGGTACGGAAATAAAAGGAGGCAGCAATAAAAGACTGGCTCCTATAAGTGCAGGAAGTGCAGGATGTTTGCTGCTACTTGGTGCAGCATTAGTTACAGGGTGTGGGAAGAAGGCAGTTACCGTGACATTTGATTCAAACGGTGGAATGTTTAAAGCGGCCGATGCGAAGGCTGCAAAGTTTACAGCAGTAGGAACGGATAATAAAATGGTTACTGTTGTGGTAAAACCAGACGCTAAAGGAAAAACTCCTGCAGATAGTATTATTACAGCTCCTAGTGGTAAAAAGTTTAAGGAATGGAATAATGTAAAGACACCAACTAAGGATGCTCCAGGCAAGACAAAAGGAGCAGCTGCAGAGTTCAGTCCATGGACTGATTTTGGTTTGCTGCTACTTGGTGCAGCATTAGTTACAGGGTGTGGGAAGAAGGCAGTTACCGTGACATTTGATTCAAACGGTGGAATGTTTAAAGCGGCCGATGCGAAGGCTGCAAAGTTTACAGCAGTAGGAACGGATAATAAAATGGTTACTGTTGTGGTAAAACCAGACGCTAAAGGAAAAACTCCTGCAGATAGTATTATTACAGCTCCTAGTGGTAAAAAGTTTAAGGAATGGAATAATGTAAAGACACCAACTAAGGATGCTCCAGGCAAGACAAAAGGAGCAGCTGCAGATTTCAGTCCATGGACTGATTTTGGTGTGAAAGACACAGAAACCAAGCTTACACTATATGCTATTTGGGAAGATGCCAAAGCTGCTGCTAAACCAGCTACGACGATGAAAAAAGATGTTACGGTAACATTTGATGCAAATGGTGGAACATTTGATGAGACCAAGGCGGTGACTGCAGGGTTTACAAAAGGAACTGATAATAAGATGGTTACTGTTATGGTAAAGGCAGATAAAACAGGAAAAACTCCTGCAACTGATATTCTTACAGCTCCTACGGGGTTGTTGCTACTGGGTGCAGCATTAGTTACAGGGTGTGGAAAGAAGCCAGTTACGGTAACATTTGATGCAAACGGTGGAACATTTGATGAAACCAAGGCGGTGACTGCAGGGTTTACAAAAGGAACGGATAATAAAATGGTTACTGTTGTGGTAAAACCAAATGCTAAAGGAAAAACTCCTGCAGCTGATATTATTACGGCTCCTAGTGGTAAAAAGTTTAAGGAATGGAATAATATAAAGGCACCAACTAAGGACACTCTAGGCAAGACAAAAGGAGCAGTTGCAGAGTTCAGTCCATGGACTGATTTTGGTGTGAAAGACACAGAAACCAAGCTTACATTGTATGCTATTTGGGAAGATGCAATTGCGTCAACACCAGCTACAACACCAGCTACAACACCAGCTACAACGCCAACTACAACACCAGCTACAACGCCAACTACAACGCCAGCTACAACACCAGCTACAACACCAGCTACAACGCCAGCTACAACGCCAGCTACAACACCAGCTACAACGCCAGCTACAACACCAGCTACAACGCCAGCTATGAAAAAAAGTGTTACGGTAACATTTGATGCAAATAGTGGAACATTTGATGAGACCAAGGCGAAGAATGCAGGGTTTACAAAAGTAGGGACGGATAATAAAAAGATTGCTGTTGTGATACAAGCAGATAAAACAGGAAAAACTCCTGCAGCTGATATTATTATAGCTCTTACTCCTGATATTGAAGAGCTTCAGGGATGGAACACTGTAAACAACCTCATAGGGGGGGGGGGGAAAGAACCAGATACAGAGTTCAGTCCATGGGATGATTTTGGGGTGCAAGAAGCAGACACAACTTTAACACTGTATGCTATTTGGAAATCGAAAAGTACCACGATAACCTTTAAGGCAGCAGGAGGAACATTTGGAAATAGTCCGAGTGGGTTTACTAAAGTAGATGAGGAAACTCTTTCTGTAGAAGTATCTGCAAATGGGATAACAGTACCTGGATCTGATGTTTTTGCAACTAAGCCTAAGACGAACCAGAATGAAAAAACATTTCTTGGATGGGGCTCGAAAGTAACTGCTTTGAATGCAAAAAAAGCTGCGGGGGGACACTTAGATCTTGGTCCCGAAGGTATCATGAATAAGATATACTATGCTATCTGGACTGATAATCCGAAGTATCTTACCATAACATTTGATGCAAACGGTGGAATGTTTAAATCGCCAGTTTCGTCTGCTTCAGGATTGGTATTAAGCAGTGATCACAAAAAAGCTACTTTACAGGTGTTGCTTGGGAGCGCACGTCAGTGGATGCGCCATCGTACGGCAAAAGTAAATGAAATTTCTGCGCGATACAGCATTCTGCCTAATGAGTTTTATATCCCATCAAAAGATGTAGTTGCACAACAGTCTTCCGATAACAGGCAGGGAAGAGACGCAGTCCCTGTGGATGAAAAACAGGCCTTACGATATATACAGCACATAAAAGAAAGCTATGAAAGAACGTACCAGTTATATGAGAAATTTATTAAAGAAAATATTGCTCGTGAGCTTGCACGAATTGTTTTACCTGTTGCCATTTATACAGAATGTTATTGGCAGATGGATTTACACAATCTTTTTCATTTTCTCCTGCTACGTTTAGATCATCATGCGCAGTATGAAATTCGTTGTTATGCGCATGTAGTTTTGCGTGTTATACGTGCGTTCTTTCCAGTTTGTACACAAGCATTTATGAAACATATGAAAAATGCGGTAAAAGTGTCGGAATCCGAGCGTAGGGTATTGGCAAAATTGTTGGAAAAAGATGATTTAGTATTGGAAATGTTGTCGCAAAAACAATTATATGAACTAAGAGAAAAACTTATGCAACAGGAAGAAGATTTCTCTTCATTATAG

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan
PF02511	Thy1	Thymidylate synthase complementing protein	Family	Interproscan
PF14821	Thr_synth_N	Threonine synthase N terminus	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000634	Binding_site	Serine/threonine dehydratase, pyridoxal-phosphate-binding site	Interproscan
IPR001926	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan
IPR003669	Family	Thymidylate synthase ThyX	Interproscan
IPR004450	Family	Threonine synthase-like	Interproscan
IPR029144	Domain	Threonine synthase, N-terminal	Interproscan
IPR036052	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR036098	Homologous_superfamily	Thymidylate synthase ThyX superfamily	Interproscan
IPR037158	Homologous_superfamily	Threonine synthase, N-terminal domain superfamily	Interproscan
IPR051166	Family	Threonine Synthase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42690	THREONINE SYNTHASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006231	Biological Process	dTMP biosynthetic process	Interproscan
GO:0006520	Biological Process	amino acid metabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0050797	Molecular Function	thymidylate synthase (FAD) activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-