Detailed information of KAK2146780.1 in Paralvinella palmiformis Gene info
Gene IDAnnotationContigStartEndStrand
KAK2146780.1TRANSAMIDASEctg583_pilon130502134474-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF01336tRNA_anti-codonOB-fold nucleic acid binding domainDomainInterproscan
PF01425AmidaseAmidaseFamilyInterproscan
PF02637GatB_YqeyGatB domainDomainInterproscan
PF02934GatB_NGatB/GatE catalytic domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000120FamilyAmidaseInterproscan
IPR002312FamilyAspartyl/Asparaginyl-tRNA synthetase, class IIbInterproscan
IPR003789Homologous_superfamilyAspartyl/glutamyl-tRNA amidotransferase subunit B-likeInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR004365DomainOB-fold nucleic acid binding domain, AA-tRNA synthetase-typeInterproscan
IPR004412FamilyGlutamyl-tRNA(Gln) amidotransferase A subunitInterproscan
IPR004413FamilyAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit BInterproscan
IPR004523FamilyAspartate-tRNA synthetase, type 2Interproscan
IPR006075DomainAspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalyticInterproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR014746Homologous_superfamilyGlutamine synthetase/guanido kinase, catalytic domainInterproscan
IPR017958Conserved_siteGlutamyl-tRNA(Gln) amidotransferase, subunit B, conserved siteInterproscan
IPR018027DomainAsn/Gln amidotransferaseInterproscan
IPR020556Conserved_siteAmidase, conserved siteInterproscan
IPR023631DomainAmidase signature domainInterproscan
IPR036928Homologous_superfamilyAmidase signature (AS) superfamilyInterproscan
IPR042114Homologous_superfamilyAspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1Interproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR11895TRANSAMIDASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004815Molecular Functionaspartate-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006422Biological Processaspartyl-tRNA aminoacylationInterproscan
GO:0016874Molecular Functionligase activityInterproscan
GO:0016884Molecular Functioncarbon-nitrogen ligase activity, with glutamine as amido-N-donorInterproscan
GO:0030956Cellular Componentglutamyl-tRNA(Gln) amidotransferase complexInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0050567Molecular Functionglutaminyl-tRNA synthase (glutamine-hydrolyzing) activityInterproscan
GO:0070681Biological Processglutaminyl-tRNAGln biosynthesis via transamidationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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