Detailed information of KAK2144938.1 in Ridgeia piscesae Gene info
Gene IDAnnotationContigStartEndStrand
KAK2144938.1SKI ONCOGENE-RELATEDctg4085_pilon830410051+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02437Ski_SnoSKI/SNO/DAC familyFamilyInterproscan
PF08782c-SKI_SMAD_bindc-SKI Smad4 binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003380DomainSKI/SNO/DAC domainInterproscan
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR010919Homologous_superfamilySAND-like domain superfamilyInterproscan
IPR014890Domainc-SKI SMAD4-binding domainInterproscan
IPR023216FamilyTranscription regulator SKI/SnoNInterproscan
IPR037000Homologous_superfamilySki-like, DNA-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10005SKI ONCOGENE-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0030514Biological Processnegative regulation of BMP signaling pathwayInterproscan
GO:0046332Molecular FunctionSMAD bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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