Gene detail

Detailed information of KAK2144016.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2144016.1	DISULFIDE OXIDOREDUCTASE	ctg793_pilon	107873	111365	+

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2144016.1

ATGAATTATGATCTTGCAATTATTGGAGCGGGACCAGGGGGATACGTGGCAGCAATACGCGCGCGACAACTTGGTATGCGGGTTGTTCTTATTGAGAAAGATAAGGCTGGAGGTGTGTGTTTGAATTGGGGGTGTATTCCTACTAAGTCTTTAATTCATCGAGCGCATGTATTTTCTCAACTGAAATCTACAGAGGCCTGGGGGGTTCGTGTTGATACTTCTGCATTCTCATATCAACATGTACACACCGAATCAAGAAATGCAGCAGCGACATTGTCACGAGGAGTTGAAGGACTTCTAAAAAAGAATCAAGTCGAATATCTTAAAGGAAAAGCCTCTCTTAAGGATGGTCGAACCCTTATTTTAGCAAACGGAAAAACCATATCTGCAAAACATATCATTATTGCTACTGGTTCTCGTTCTAAGAGCATTGCTGGCTTTACTATTGATGAGGATACTGTGTTAAGTTCTCAAGGGGCTCTCTCAATGACGAGATTACCTCAGAGAATTGTAATATTGGGTGCAGGAGCAATCGGGATGGAATTTGCTTATATATTTAGTTCTTTTGGCGTAAAAGTTACAGTCGTAGAGATGGCCAAGGAAATACTTCCGTTAGAAGACACACAGATGGCTTCATTTATCAAAACACATATGAGCAAGAAAGGTATAACATTTGCTACCAGTACGATTGCGCGGGAACTCAAAAAAGGAAAGAATCTTTCATTGCTTTTAGAGAGCACTTATGGAAAAGAAAAAATAGTAGAAACCGATGCTGTTTTGGTTTCAGTGGGGCGTCAGCCCCATATTGAAGATCTGGGGCTGGAAAAACTGGGGGTGCATACCAAGCAAGGTTGTATTGTAACGGATAACTATGGCAAAACATCGATGGACTCGGTGTACGCTATAGGAGATGTCAAAAGTACTGCACAGCTTGCTCATGTAGCGAGCAAGGAAGGAGAAATTGCCGTAGAACATATTGCAGGAAAAAAGAATATCCGGATTATTGATCCTGATACCATCCCTTCCGCTATATATTGTGAACCTCAACTTGCTAGTTTTGGTCCAAGTGAGGATGCTTTGCGAAAAAAGACTGTCAAAATAAAGAAGTTTGTATTTCCTTACCAGGCTTTGGGTAAAGCAGTAGCTACTTCTCAGACAGGTGGTATGATAAAATTACTCTGCGCTGAGGATACGCATGAAGTGATAGCATGTCATGTGGTTGGATATAATGCTACGGAAGTTATTCATGAAGTCTTACTTGCAAAACACAGCGAATTATTGGCAGAAGACCTGGCAGATTATCATTTGCTTACAACCAGGCCAGCAGTGAATGATATTCGAAAAGTGTCTGAAATGGCAAAAGGCTTAATAATAGACTATATTTCCTGTGGTATAGATCCTGAACTCTCTGTGATCTATCTGCAATCTGCAGTACCAGAAGTCTGTAAATTACAACTTATACTTTCCATGCTTGTTACTGTTCCTCGACTACAGCGCTTGCCTTCTCTTAAAGATATGGCTCATGCTGCTGGTTTGCAAGAAATGCCATTTGGTCTTTTGGGATACCCGATCTTGCAAAGTGCTGATATATTACTTTCTCGTGCCAATGTGGTACCAGTGGGAAAAGATAATGAATCACATGTAGAGCTGACGCGGGAACTTGCTCGACGTTTTAACCATATGTATGCGGAAGTGTTTCCCATGCCCCAGGCAATAGTGGGGGATATTCCCACACTAGTAGGCACTGATGGAGCAGCAAAGATGTCAAAATCTTTAGGAAATGCAATTCTTCTTTGTGATGATGAACAGACAGTCAACAAAAAGGTGCGCAGCATGTATACTGATCCCAAACGAATTCGTGCAGACATGCCAGGCACAGTGGAAGGGAATCCTGTATTTATCTATCATGATGCATTCAATACGGACAAAGAAGAAGTGGAAGAATTAAAACAGCGTTATCAAAGCGGTAAAGTGGGCGACGTGGAAGTTAAAACAAAGCTTGCTAATGCAATTAACACATTTCTTGATCCTATCCGCGAGAAACAGATGATATTTATTGAAAAGAAGGGATATGCAGAAGAAATTCTTTATGAGGGAAGTAAAAGAATGCAGAAAACTGCAAAAGAAACCATAGAATTAATGGAAGAGGCAATGGGATTCCACGATATATGGCAGAGATTTGGACTTTAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00579	tRNA-synt_1b	tRNA synthetases class I (W and Y)	Family	Interproscan
PF02852	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002305	Family	Aminoacyl-tRNA synthetase, class Ic	Interproscan
IPR002306	Family	Tryptophan-tRNA ligase	Interproscan
IPR004099	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan
IPR006258	Family	Dihydrolipoamide dehydrogenase	Interproscan
IPR012999	Active_site	Pyridine nucleotide-disulphide oxidoreductase, class I, active site	Interproscan
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050151	Family	Class-I pyridine nucleotide-disulfide oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22912	DISULFIDE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004148	Molecular Function	dihydrolipoyl dehydrogenase activity	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0004830	Molecular Function	tryptophan-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0006436	Biological Process	tryptophanyl-tRNA aminoacylation	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016668	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-