Gene detail

Detailed information of KAK2142205.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2142205.1	PR DOMAIN ZINC FINGER PROTEIN	ctg985_pilon	132659	134956	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2142205.1

ATGGAAACTGAAGGTGCCGAAGCAAAGGAAACAGGAAGTGCTGGTGATTTAGTCATACAGAGTGATGTTGACTCAGTCAAAACAGAATCATCAACGAGTGACATGAATGGTGAGGATGATGCAAGTAGCATTAAAAGTGATCATGTCTGTGAATTGTGTCATCGTGGATTTGCAAACAAACGAGAATATGTCCTACATCAGTACAACCACAAGGAAAAATGCAGCTACTACTGTGCATTTTGTTTCAAAACCTTCCCCTCCGAGTTCGCCTTTAAGCGACACAATAAATTTCATGAGAAGAAGAAGACCAAGTGTATATCATGTCGTATTTGTGACAAGGAATTTGAGTATGTCAAGGACTTGGAGGAGCATCACAGACAGTCCCATTTAAATGAAAAGATGTTCCGTTGTAAGCACTGTCAGGCAACATTCTCTTGGAGAGAAAATCTGAACAAACACATGCGCATGCATGAGGGGCCACCGTCAAAACCTGATCACAAATGTGCCAAGTGTGGCAGGGCATTCATGGACAACATCAGTCTCCGTCTGCACATCTGTGACGCAAACAAGAAATCTGACGTGTCAAAGCCAGACAAGCCTTTTGTGTGTAAAGTATGCAACAAGGCTTTCAGGTTCGACTTCAGTTATGAGGCACACATGAATTCGCATGAAGGACCCGTTGCGATGAATGCCTTCAGAAAGATCCACATGAAGGCTCTTGAGGAGAAGAAGAAGAAAGTCCAAGAAGAGGCTGTGAAGAAGCTGCAGACAAAGGATCTCACTCCGGCTAAAATTATCCAGAAACCCATGAAGCTTGATGTTGTTCCACAGAAATTAAAGTCGGATGCAAGCACTGCGCTGAACAGTGATGTGCAGAATTCGTCCGATCTGCGTGAGATTGTACTGGAGATTGTGAATGTTAATGAACTGCCAAAACCTGCTTCCATGGAAGGTGCACAAATACTGGCTGAAGGCAGTGAGGGCAGTGCAACAGCCACAGTTCCCATAAAAGACTTGATACCAATGCGTACCCTTCATAAAGCAAGTGTTACACAGGCACCGGATGACATTGACCCAATCGAAACTGTTTCAGAAAACATTCAGCAGACATCGCAGCTCGAAGCACCATCTGAAACTGTTATGAATGCATTGAATGATGTAGAAAATAGAAACTGTTCTGATGACAAAGAAATTGTTATGGACAGTCCCGGTGAAAATGATAGCATCTCTCTTAGTCCTGATAAAGATGCAGACTCGCAAAAAGATGATAGCCTGCCTCGTGATGCTGATGCAGATGATGCATCATGTAAAAAGTTAGTCAGCACTGTGACTACCACTCCACATACATCAAGAAGGGGTAAAAAATCTAGCAAGAAACCACCGAAACGTCCAAAAAGACCCCTTCTGTACGACTATGTGATGACGGAGGAGAAGCCATTTGAGTGTCCAGAATGCAAGATGGAGTTTCGATGGGAGATCAGTCTAACCATACACATCCAGGAGCACATTGGTGGAGTGCAGAATACCAGGAACACAAGGGGTAGGGTTCTAAAGAAGAAACTTCCATCAGGACCAGTTACTTCGAAGATAGTGTACAGACGTGCATCATCCGATGAAGAGGATGATTATCATGAGACAGACTTTCAGTATGAAGATGTGAGCATGAACCAGTTCCAGAAGCGGAAACGCGGACGTCCTCGAAAGTATGACAATAGTGCTGCCTCCTCTGCACCACCAGAGAAACGTCGTCGTGGACGCCCTCCGAAGGATCCATACAGGAGGACATCTACTGGGAATGAAACAGTTGTTATCCGAGTGACAAGAGGAGAGAGTGGTAGGCAGTCATCAACAGGTAAAGAACCAGGGCAAGCTCTGCCAGAGAAAACTACACCACAAGAGATGAACACGCAAGATATCATGTGTAATGTGCACATTCCAAAACATCGGCTAATTAGGTTTTATCTGCTTCGACAGCTAAAACTATCCAGGAATCGTGGATTTTTTCCGTGTCGTTTCTGCAGTGCACCCTTCAGTTGCAAGGCATCGCTTAATATGCACATCCTGCGTCACACAGGCAAGGGTTCATACACTTGTCGTTACTGCCATCAGAAGTTCCCAGACCACCGCACACTGGTGTTACATCAACTGATTGAAGAGGAAGGCGCCATGAAGTCACCCCACCAGTGTAGTACATGTTTCAGGGTGTGTGCAAGTGCGCATGGCCTTGCTAGGCATCTAAGGAGGCATCTAGCAGTTGTGTGGCCAAGTTCTCGACCAAGAGCTAAGGTCACTGAATGA

Transcript

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR017956	Conserved_site	AT hook, DNA-binding motif	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR050331	Family	Zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16515	PR DOMAIN ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0010468	Biological Process	regulation of gene expression	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-