Detailed information of KAK2141496.1 in Paralvinella palmiformis Gene info
Gene IDAnnotationContigStartEndStrand
KAK2141496.1UNCHARACTERIZEDctg1091_pilon7305675297-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02603Hpr_kinase_NHPr Serine kinase N terminusFamilyInterproscan
PF04552Sigma54_DBDSigma-54, DNA binding domainDomainInterproscan
PF04963Sigma54_CBDSigma-54 factor, core binding domainDomainInterproscan
PF07475Hpr_kinase_CHPr Serine kinase C-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000394FamilyRNA polymerase sigma factor 54Interproscan
IPR003755FamilyHPr(Ser) kinase/phosphorylaseInterproscan
IPR007046DomainRNA polymerase sigma factor 54, core-binding domainInterproscan
IPR007634DomainRNA polymerase sigma factor 54, DNA-bindingInterproscan
IPR011104DomainHPr kinase/phosphorylase, C-terminalInterproscan
IPR011126DomainHPr(Ser) kinase/phosphorylase, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR028979Homologous_superfamilyHPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR30305UNCHARACTERIZEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000155Molecular Functionphosphorelay sensor kinase activityInterproscan
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0001216Molecular FunctionDNA-binding transcription activator activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0004672Molecular Functionprotein kinase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006109Biological Processregulation of carbohydrate metabolic processInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0016987Molecular Functionsigma factor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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