Gene detail

Detailed information of KAK2141129.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2141129.1	ZINC FINGER PROTEIN	ctg1156_pilon	34077	52016	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2141129.1

ATGGCAGCACAGATGGAAGAGATGAGCTCGAGTCATAGTCGAGTTCTCTCTTCCGGAATTTACCAGCTGCTGCTACAGCGGCGCATGTTGGATGTCACCATCACCTGTGGTGGGGAGGCCATCATGGCGCACAAAGCGGTACTGGTATCCTACAGCAAGTTTCTGGATACAGTTTTTGCCGGCCAGGGCGATGACTGCGATGTCCTGAACATGGATAATCTTGGACTAGAGTTTGAAGCCATTAGGGCCGTGATATTCTTCATGTATAAAGGAGTAGTAGATACGGAGCGCTGTGGAGATGCAGCTTTTCAGCAAGCAGCCAAGGTTTTGTGCGTAGATGTCAGCACCGAGTCCTCTGCTGCCACTATTAAACCTGAGGCACCCGTACCATCTATCATCGCCACTTCACCGCAGGTTGTCAAGTCCACAGCCGAGCCGGAGCAAACACCATCCGCTACCGTGCAGCCAGGCAGATCCGTGACATCAAAGCCGGGTAAGCTTACATCAAAGCCACCATTAAAGAACAAGATGGTTGACCAATACACCATGACTGAACAGTCACGCATTACGAAGCTCTCACGTGAAGTTCAGACCGACTACAAGATTACGGGCTTGCCCAGTGAGTCTGAAGCCGAACAAAAGAAAAAGAAGTCCAAGAACGCCTACGTTCAGACCGATTTCAGCCCATTGAAGCTCTCACCCGAGCTACAAAACAAGCCACGTATCTTGGTGGACTCTGCTATAGAGAAGTCGGTTGGCGACAAGCCCGAAGCTAAGGTAGTTGAAAAGGAAGAGGATGATTTAGCAACTGAAAAAACAGTGAAGACACCACCACCCGCTGTCAAAGTGAAGAGAAGACCGGGCAGACCACCTAAAAGTTTAAATGAAGAGAAGAAACCGCCTTCCCCAAAAGAGGATATCGTTAAGGAAGAGGAACTCGACAAGGAGTTAATGAGTCCAGATAGCTGTGACCCAGTTACTCCGGTCAGAACGAGCATGAGGAAGCGCAAAATCAGTGCAAAGCTGAAAGACAATCTTGAAGGAAATGATCTTCTTCAGGAGATATTAAAACCCAGAATGGTGGCGAGCGTGACCAAATCAAAAGAAAGTCTGACACCAACTCCGAAACGAGGAAGAGGTCGGCCGAGGAAATATCCTCCAAAAGAAACACCTGAGCAGCCAAAAAACGTGAAAGCCTCCCCCTCCGAGATGAAAAAGCTGATTGTCAAGTTGACGAGGACCGAGACAGTCCCCGAAAACGACAGTGCATCAGCCGATGATGTCCATGTCAATCCAGAAGAAGACAAGGACATAGAGGGGGAGGCTAAAACTGATGCCGAGAGCCACGTCAAAGATCCAGATTTTTCTGGGGGGCGATCTCCTGGTGGTTGTCCAGAACGTGTGAGACGGCGCCCACGTGGTTATAATATTCGACTTTTAAGAAGCCGTGGCCTGAGTGTTAGAGCTAAAAGTGACCTGCACAGTGAGAATAAGAGATATTTGTGGAAGAGAACAGAAGATGGTGCTTACCGGTGTCTGCTGTGTGACTGGCAGAGAGAGAGTTCCCGGTCTCTTACTGTACATCTCAGAATACATCTTGGCGAGAAGCCCTTTGTCTGTGATATTTGCAACAAGGCCTTCCGCACTACTGATAAACTAAGAGACCACGTTAGAACACACACAGGTGAAAGACCATTTTCCTGTCCAATCTGTTCACGAGGGTTCAGTACGAGAAAAAATATGGCACGGCACAAGGAGATACATCAACGAGATAATCCACTGAATAAGTGTTACCTGTGTGAAGAATGTGGCGCCAGATTCTATAGCGTGAAGCGGCTGAACAGTCACATAAGACGACGACACGGTATTCTTCTAAAGAAGCGAATACCCTGTCAGATTACGGATTGTGATTTTACAGCTGGAGATAAGAAAACAATGATATATCATTTGGCAGAGGTCCATGGTCATGCCCTGCCTGCCGAATTGGTTACTGTATGTAACGTTTGTGGAGCTTCCGTTCGCAAATCATCTCTCAGGATGCACATGATGATCCATGCAGCAAAAAACATCAAGTGTGAACACTGCAACTTCGTCACTCAGTACACGCAGACCCTGAAGGGACACATGCGCCGTCTGCATGGGATAAACTTGGACGGGACGCCCGCTGTGCGGCCATACGTGTGCGACATCTGCCCAGAGGCATACTTCTCACGCCAGCAGCTGACCTACCACAAGATGAGGCATGCCGGAGAGAAACCGCATCTCTGTCCAATTTGCAACTTCAGAACCGTCGACAAGGGATCGATGAACATGCACATCAGAACGCACACGGGTGTGATGCCGTACAGATGCAAGCACTGTGAAAAGTGCTTCAAGCAGAGCAGCGCCCTCTCCTGGCATGTGAAGACGGTCCACATGGGACTGCGCCGCTTCACGTGTACTGACTGTGACAAGCATTACGTGAACAAGAAAGATCTGCACGCCCATAGATTTAGCAAGCATCTCTACATTAAGCCGTTTTCATGCAGCATGTGCTCATATTCGTGTACAAAGAAGGACTACATGATAACCCACATTGAAAAAGCACATGGATCTGAATACATCCCGGAAGATCTCAAGGATATGAAGCAGATCCTGAATGCAGTCACAAAGCTGGAGGACATCAGCCAGTCAAACGAGGATCAGTTTGCTGATGCACCATCGGGCCAGTCTGATGGGACACTGACGACTGTAGCTCAGTTTGCTGGCAGCGAGATATCGTCAATAGAGAACAGCACCAACAATATCCCTCTGCTTATAGTATCAGAAAACACCCTGAAAGATCTCTTGGTACCGCAGTCTGGTGTTGACGTCCAGACGAAGCTGGAAGATCAGCCGGATCTGATGCCACAGAGCGAGATAAAATGTGAAGATATAACGCCAAAATCTGAGGCCACCGATGATCGCCAAGAACAACATACTGATAGTGACTTGGCACTACAGCAAGTACCAAGAGATAAAAACGTCCAAGATACGAGTGCCAACTACAGAGTACAAAATGACGAAGAACATAAACATATCATTCAAGTGACTGAAGACACAAAAGATGAAAATATTATTTGGTCGGTTGAAACAACACGGCAACAAATTGGCGACAGTAAAGTGGACATAGGGAACAGTAATCCCACTGCGTTGGTACCAGTTGATCCTGACTCCGTGGGTGTGATACAGTCACCTGAAATCGGTGAATTGACGTACCAGCAAGAGGCTTTGCAACCCGAAGAATGCCCGGTATTCCAACGGGGACATGACGTAGATGGTGCACTTGTAGCAGAGACAGCAACAAAGCAGAATGATGCAGAAGGCGTGGGGAGTGAAGCACGTCCAGCCGAAGAGGACGGCTATCAGTTGCAGCTGCTCGAGACCGGCCAAGAGCCTGACACTCATCCAGACGAATATGCCGAAGAGCAGCAGTTTGTCGAAATAACTGAGGAGCAGCTTCGGATGTCAGACGGTAGGTTCATTGTCGTGGATGAGAGCTTGCCTGGTGAGCAGCAGGTGATCATGATAACTGGCAACAAACAGCTCGTGCTGGAACCGGGTCAGCAGCTCTTACAGGCCGATGGAGAATCATTGATTATAATGTCAGAAGAACAGGCTACAATGGTGGCTAGCCAAGGTGAAATGTAA

Transcript

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB
Transcription Factors Family	ZBTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF00651	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR000637	Conserved_site	HMG-I/HMG-Y, DNA-binding, conserved site	Interproscan
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR017956	Conserved_site	AT hook, DNA-binding motif	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24394	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-