Gene detail

Detailed information of KAK2140121.1 in Paralvinella palmiformis Gene info

Gene ID	Annotation	Contig	Start	End	Strand
KAK2140121.1	XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER	ctg1479_pilon	11505	27774	-

Gene Structure

More details in Jbrowse Sequence

CDS

KAK2140121.1

ATGGTGTGCCAAGCTGTGAGAGCAGGGGCCACCGGCGGAGTCTTCTATGAGGAAAGGGCTGACATTGAACCTCGTAAGCGAAGGAAAAAACTAAAAGAGATTCATGTTGATATAGTTGACATTAATAATGAAACAACTCTAGCTGAAGATGATGACACTTCAAACGGTTGTAAGGACAAATTAGGTCTACTCTACAGCATCACTGACACACCTCCATGGTACCTGTGTATATTTTTGGGCTTTCAGCATTATCTTACCGCATTTGGCAGTACGTTGTCCATACCTCTGATACTAGCTCCCGCTTTCTGTCTGGGACCAAATGACGTCGGAACAGCAGAAATTCTCAGTACCCTGATTTTTGTATCGGGCATCGTCACATTATTACAAACCACGCTGGGAACAAGATTACCAATATTACAAGGTGGAACATTCTCTTTCCTGGTGCCCACGTTTGCTATTCTCAATCTGCCAAAATGGCAGTGCCCGGATTTCTCGGACACTTTACCATCTGATCCAGACAAGTGGGGATATCTAGCCAGGACCGATACGAGAATAGAAGTGTTAAACAAAGCAAAATGGTTTCGGATTCCTTATCCATGTCAGTACTCCGATTGTGTAGTGTGCGATAAACATTCAGGTTTTCAGTGGGGATTACCAACGTTTAGTGCAGCTGGTGTATTCGGGATGTTGGCTGGGGTTATTGCTGGCATTATGGAATCACTGGGAGACTATTACGCATGCGCACGTTTGTGCGGCGCTCCACCGCCCCCAGTACACGCTATAAACAGAGGAATCATGATTGAAGGCATAGGATGTGTTTTAGCTGGTATGTGGGGATCGGGTAATGGGACTACTTCATACAGCGAGAATATAGGTGCTATTGGTATTACTAAGGTAGGTAGTCGTGTTGTGATCCAGACAGCAGGATTTATCATGATTCTACTTGGAATGTTAGGAAAATTTGGAGCTCTTTTTGTCACCATTCCACAGCCTGTTGTTGGGGGTGTATTTATGGTAACATTTGGTATGATAACAGCAGTAGGCATATCTAACTTGCAGTATGTCAGCATGAACTCATCCAGAAATCTGTTTATTGTTGGCTTCTCATTATTTTTTGGTTTGTCGATGCCACAATGGATGTCTTCACATCCAGATGCAATTCAAACAGGTGTTTCCGAATTAGACCAAATCCTCACCGTTTTGCTGAGTACAGGAATGTTTGTTGGAGGTACAATAGGATTTACCTTGGATAACATCATACCTGGAAGCGAAGAGGAACGAGGTCTTAAAAATTGGAGAAAGACGCTTGAAGAAGACCAGGACAAAGCCAACGAACCTGCCTTAAAGTGTTATGACTTTCCGTGGTGCATGGCAAGCGCTCCAGGGATCCATATACCACCCAGATGGATCACAGAAAAGGCAGATTGGGATCTCTTTGCGAAGAAATTAAGAAACTCTCCAGACCCGGATATCAATCCATCCCTCGACAATCGCCTTCAATCACTACTTCACGACGTAAACACAGCAGCGAAGGAAACAATCCCCATTTCAAGAACAAAGGCCACCCAGTCTACTCGTACCTTCCTTCCCCCAGAAGCAAAAAAATGGACGAAACAAATCAACTATAGATGCCATCGTTCATTTAGCAACGAAAATCACAGCCAGAAAAGGCCCAAAAGAAGAAAAGCAGTGTTCGTCGCCTCCATGGACCTGGACAAGGCATTCGAGGGCGTTGATCATCTATCCATGCTGGACTCCCTTATCTCCTTTGGCATATCTGGGAGGATTATCACATGGATAGAGAACATACAAGGAACCATCTCCGACCCCCACAATCTCACTACTGGCTGTTCTCAGGGGTCAACAATATCTCCCACCATCTTCAACGGTCTCGTCTCCCAACTCCTGACTGTCACTCTACCAATATCTGTAGACATCCTTGCTTATGCCGACGACCTTGTTCTGATTTCACACGGAAGTAAACCAGCAGAGAAACTCCCAAAACCCCTAAACGCAGTAGACAAAACAGCTAATAACTCATACTTCTCTCCAGCTAAAACCAAGACCATGGCTTTCACCACAACTAGACAACCTAAATTTAAACTCGGCCTACAACACCTAGAAATGGTCAACGACTCTAGATATCTCGGGGTAACCATAGACAGAAGACTCAGCCTCATTCAACACGAAGAACTAAGAGGCCTCATCCCAAACCACACCCCGATCACCTTAGCCGAGCTGCACGCAGTCAAAGCAGCACTAACATGGCTATCGAGACAGACTATCCATGAAAGAGTCATCATCCACTTGGACTCTATGGGAGCACTAACCATCATCACCACAGCCAATTTCCACACCTACCCGGAAATCATCACAGATATATACACCACGGCATCAGCTCTCAAGCAGCGTGAAATCCAAGTAATACTCCACTGGGTTGCATGCCACATTAACCTTGAGGGCAACGACCGAACCGATAAACTAGCTAACGAAGCCACGAGCCTAGACGTCATCGAATATGCCGAACATACCCCAGGCACATTCAACTATCTTGTTGACAGATTCATCTCCAATCGACTGTAA

Transcript

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00860	Xan_ur_permease	Permease family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR002156	Domain	Ribonuclease H domain	Interproscan
IPR006043	Family	Nucleobase cation symporter 2 family	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11119	XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-